RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

15 rows where bioproject = "PRJNA408129" and tax_phylum = "Rotifera"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Rotifera · 15 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA408129 · 15 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15721060 15721060 PRJNA408129_S_NODE_173_length_531_cov_11548.965587_g160_i0 PRJNA408129 173 531 11548.965587 61325.00726697 Metazoa 33208 Rotifera other_Eukaryota 136 9.83e-34   NR CAF0742170.1 104777 g160 i0 76.1 6.92655367231638 88 21 49.7 0 524 261 579 666 CAF0742170.1 unnamed protein product [Brachionus calyciflorus] diamond 3678 136 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
20820143 20820143 PRJNA408129_S_NODE_2997_length_304_cov_17.689139_g2979_i0 PRJNA408129 2997 304 17.689139 53.77498256 Metazoa 33208 Rotifera other_Eukaryota 84.3 5.85e-18   NR RNA21358.1 10195 g2979 i0 68.9 6.99671052631579 61 18 59.2 1 3 182 113 173 RNA21358.1 ferritin [Brachionus plicatilis] diamond 2127 84.7 0.995277449822904 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
26980550 26980550 PRJNA408129_S_NODE_24282_length_168_cov_4.770992_g24264_i0 PRJNA408129 24282 168 4.770992 8.01526656 Adineta ricciae 249248 Rotifera other_Eukaryota 54.7 7.43e-7   NR CAF1280549.1 249248 g24264 i0 80 1.07142857142857 30 6 53.6 0 95 6 86 115 CAF1280549.1 unnamed protein product [Adineta ricciae] diamond 180 54.7 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
27991637 27991637 PRJNA408129_S_NODE_11025_length_215_cov_5.792135_g11007_i0 PRJNA408129 11025 215 5.792135 12.45309025 Rotaria sp. Silwood1 2762511 Rotifera other_Eukaryota 59.7 2.71e-8   NR CAF3861611.1 2762511 g11007 i0 54.2 0.669767441860465 48 22 67 0 64 207 581 628 CAF3861611.1 unnamed protein product [Rotaria sp. Silwood1] diamond 144 59.7 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sp. Silwood1
28307271 28307271 PRJNA408129_S_NODE_11626_length_212_cov_2.862857_g11608_i0 PRJNA408129 11626 212 2.862857 6.06925684 Didymodactylos carnosus 1234261 Rotifera other_Eukaryota 66.2 1.37e-11   NR CAF0817539.1 1234261 g11608 i0 51.4 1.0188679245283 72 30 97.6 2 3 209 58 127 CAF0817539.1 unnamed protein product [Didymodactylos carnosus] diamond 216 66.2 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Didymodactylos Didymodactylos carnosus
28812125 28812125 PRJNA408129_S_NODE_11348_length_213_cov_9.409091_g11330_i0 PRJNA408129 11348 213 9.409091 20.04136383 Rotaria sp. Silwood1 2762511 Rotifera other_Eukaryota 46.6 8.69e-4   NR CAF4646489.1 2762511 g11330 i0 46.2 1.33802816901408 39 21 54.9 0 117 1 109 147 CAF4646489.1 unnamed protein product [Rotaria sp. Silwood1] diamond 285 46.6 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sp. Silwood1
28955633 28955633 PRJNA408129_S_NODE_7068_length_244_cov_2.743961_g7050_i0 PRJNA408129 7068 244 2.743961 6.69526484 Rotaria 231623 Rotifera other_Eukaryota 64.3 9.36e-10   NR CAF4985287.1 2762511 g7050 i0 55.2 6.78688524590164 58 26 71.3 0 7 180 456 513 CAF4985287.1 unnamed protein product [Rotaria sp. Silwood1] diamond 1656 64.3 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sp. Silwood1
29380776 29380776 PRJNA408129_S_NODE_35829_length_150_cov_2.690265_g35811_i0 PRJNA408129 35829 150 2.690265 4.0353975 Adineta ricciae 249248 Rotifera other_Eukaryota 54.3 8.46e-7   NR CAF1302854.1 249248 g35811 i0 56.5 1.84 46 20 92 0 142 5 285 330 CAF1302854.1 unnamed protein product [Adineta ricciae] diamond 276 54.3 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
29555111 29555111 PRJNA408129_S_NODE_12430_length_208_cov_1.461988_g12412_i0 PRJNA408129 12430 208 1.461988 3.04093504 Eurotatoria 2816136 Rotifera other_Eukaryota 57.8 1.69e-8   NR CAF5150111.1 392030 g12412 i0 100 3.76442307692308 29 0 41.8 0 15 101 108 136 CAF5150111.1 unnamed protein product, partial [Rotaria magnacalcarata] diamond 783 57.8 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria magnacalcarata
29917707 29917707 PRJNA408129_S_NODE_16851_length_188_cov_4.801325_g16833_i0 PRJNA408129 16851 188 4.801325 9.026491 Rotaria sp. Silwood1 2762511 Rotifera other_Eukaryota 66.2 6.05e-11   NR CAF3893164.1 2762511 g16833 i0 51.6 9.8936170212766 62 30 98.9 0 2 187 181 242 CAF3893164.1 unnamed protein product [Rotaria sp. Silwood1] diamond 1860 66.2 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sp. Silwood1
30107025 30107025 PRJNA408129_S_NODE_19312_length_181_cov_1.291667_g19294_i0 PRJNA408129 19312 181 1.291667 2.33791727 Rotaria sordida 392033 Rotifera other_Eukaryota 75.1 5.82e-14   NR CAF1082272.1 392033 g19294 i0 56.9 0.961325966850829 58 25 96.1 0 176 3 382 439 CAF1082272.1 unnamed protein product [Rotaria sordida] diamond 174 75.1 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sordida
30960276 30960276 PRJNA408129_S_NODE_13214_length_203_cov_5.728916_g13196_i0 PRJNA408129 13214 203 5.728916 11.62969948 Adineta ricciae 249248 Rotifera other_Eukaryota 42 0.0405   NR CAF1497617.1 249248 g13196 i0 57.9 0.561576354679803 38 16 56.2 0 146 33 75 112 CAF1497617.1 unnamed protein product [Adineta ricciae] diamond 114 42 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
31592724 31592724 PRJNA408129_S_NODE_12236_length_209_cov_1.546512_g12218_i0 PRJNA408129 12236 209 1.546512 3.23221008 Rotaria sp. Silwood2 2762512 Rotifera other_Eukaryota 57 2.22e-7   NR CAF4286779.1 2762512 g12218 i0 49 3.66028708133971 51 26 73.2 0 28 180 461 511 CAF4286779.1 unnamed protein product [Rotaria sp. Silwood2] diamond 765 57 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sp. Silwood2
31782128 31782128 PRJNA408129_S_NODE_27877_length_161_cov_10.282258_g27859_i0 PRJNA408129 27877 161 10.282258 16.55443538 Adineta vaga 104782 Rotifera other_Eukaryota 50.4 1.18e-6   NR UJR13821.1 104782 g27859 i0 95.5 0.819875776397516 22 1 41 0 147 82 35 56 UJR13821.1 hypothetical protein I4U23_000832 [Adineta vaga] diamond 132 50.4 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
32527009 32527009 PRJNA408129_S_NODE_15919_length_192_cov_1.696774_g15901_i0 PRJNA408129 15919 192 1.696774 3.25780608 Rotaria 231623 Rotifera other_Eukaryota 88.6 1.91e-21   NR CAF3559733.1 392032 g15901 i0 83.7 2.015625 43 7 67.2 0 191 63 26 68 CAF3559733.1 unnamed protein product, partial [Rotaria socialis] diamond 387 88.6 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria socialis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;