RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

27 rows where bioproject = "PRJNA408129" and tax_phylum = "Cnidaria"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 27 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA408129 · 27 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4910725 4910725 PRJNA408129_S_NODE_21764_length_174_cov_3.131387_g21746_i0 PRJNA408129 21764 174 3.131387 5.44861338 Pocillopora 46730 Cnidaria other_Eukaryota 154 3.9e-33   NTclustered gi|1524902315|ref|XM_027203704.1| 46731 g21746 i0 83.636 68.448275862069 165 25 94 2 11 174 295 132 PREDICTED: Pocillopora damicornis ubiquitin-60S ribosomal protein L40 (LOC113686101), mRNA blastn 11910 154 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Pocillopora Pocillopora damicornis
9346447 9346447 PRJNA408129_S_NODE_14768_length_196_cov_5.710692_g14750_i0 PRJNA408129 14768 196 5.710692 11.19295632 Eunicella cavolini 317547 Cnidaria other_Eukaryota 52.8 0.017   NTclustered gi|2918369539|emb|OZ237721.1| 317547 g14750 i0 100 0.428571428571429 28 0 14 0 160 187 15411343 15411370 Eunicella cavolini genome assembly, chromosome: 5 blastn 84 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Eunicellidae Eunicella Eunicella cavolini
15721069 15721069 PRJNA408129_S_NODE_18113_length_184_cov_3.149660_g18095_i0 PRJNA408129 18113 184 3.14966 5.7953744 Craspedacusta sowerbii 128124 Cnidaria other_Eukaryota 339 1.08e-88   NTclustered gi|1100820113|gb|KY083050.1| 128124 g18095 i0 100 100.108695652174 183 0 99 0 2 184 16 198 Craspedacusta sowerbyi isolate AGC1001 large subunit ribosomal RNA gene, partial sequence blastn 18420 339 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Limnomedusae Olindiidae Craspedacusta Craspedacusta sowerbii
17660241 17660241 PRJNA408129_S_NODE_11894_length_210_cov_6.312139_g11876_i0 PRJNA408129 11894 210 6.312139 13.2554919 Acropora 6127 Cnidaria other_Eukaryota 56.5 0.001   NTclustered gi|2113819634|ref|XM_029341279.2| 45264 g11876 i0 96.97 0.314285714285714 33 1 16 0 23 55 389 357 PREDICTED: Acropora millepora piggyBac transposable element-derived protein 4-like (LOC114962323), mRNA blastn 66 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora millepora
24644732 24644732 PRJNA408129_S_NODE_17620_length_186_cov_1.724832_g17602_i0 PRJNA408129 17620 186 1.724832 3.20818752 Anemonia sulcata 6108 Cnidaria other_Eukaryota 54.7 0.004   NTclustered gi|2917940752|emb|OZ237570.1| 6108 g17602 i0 100 0.155913978494624 29 0 16 0 14 42 8470354 8470382 Anemonia sulcata genome assembly, chromosome: 16 blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
26885907 26885907 PRJNA408129_S_NODE_5261_length_263_cov_8.216814_g5243_i0 PRJNA408129 5261 263 8.216814 21.61022082 Actinostola sp. cb2 3060491 Cnidaria other_Eukaryota 56.2 8.04e-7   NR KAK3730803.1 3060491 g5243 i0 43.1 8.50950570342205 72 40 82.1 1 227 12 296 366 KAK3730803.1 hypothetical protein QZH41_001164 [Actinostola sp. cb2023] diamond 2238 56.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actinostolidae Actinostola Actinostola sp. cb2023
26965582 26965582 PRJNA408129_S_NODE_9282_length_226_cov_4.920635_g9264_i0 PRJNA408129 9282 226 4.920635 11.1206351 Metazoa 33208 Cnidaria other_Eukaryota 69.7 9.6e-12   NR CAB4014746.1 317549 g9264 i0 52.9 13.3274336283186 68 26 90.3 2 205 2 1163 1224 CAB4014746.1 DNA polymerase [Paramuricea clavata] diamond 3012 69.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Plexauridae Paramuricea Paramuricea clavata
27360148 27360148 PRJNA408129_S_NODE_1263_length_367_cov_8.503030_g1245_i0 PRJNA408129 1263 367 8.50303 31.2061201 Hydra vulgaris 6087 Cnidaria other_Eukaryota 54.7 9.61e-6   NR XP_065648980.1 6087 g1245 i0 50 1.9700272479564 52 26 42.5 0 167 12 231 282 XP_065648980.1 uncharacterized protein LOC100213181 isoform X2 [Hydra vulgaris] diamond 723 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
27770710 27770710 PRJNA408129_S_NODE_24524_length_168_cov_2.167939_g24506_i0 PRJNA408129 24524 168 2.167939 3.64213752 Paramuricea clavata 317549 Cnidaria other_Eukaryota 53.9 1.58e-6   NR CAB4028238.1 317549 g24506 i0 50 3.42857142857143 54 24 92.9 2 168 13 144 196 CAB4028238.1 DNA polymerase [Paramuricea clavata] diamond 576 53.9 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Plexauridae Paramuricea Paramuricea clavata
27991649 27991649 PRJNA408129_S_NODE_34125_length_152_cov_3.504348_g34107_i0 PRJNA408129 34125 152 3.504348 5.32660896 Paramuricea clavata 317549 Cnidaria other_Eukaryota 50.4 2.02e-5   NR CAB4017999.1 317549 g34107 i0 44.7 0.927631578947368 47 26 92.8 0 7 147 53 99 CAB4017999.1 Gastrula zinc finger [Paramuricea clavata] diamond 141 50.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Plexauridae Paramuricea Paramuricea clavata
28639853 28639853 PRJNA408129_S_NODE_24747_length_167_cov_5.007692_g24729_i0 PRJNA408129 24747 167 5.007692 8.36284564 root 1 Root_unresolved Root_unresolved 57 7.77e-8   NR CAB4008445.1 317549 g24729 i0 50.9 7.61676646706587 53 26 95.2 0 165 7 55 107 CAB4008445.1 Hypothetical predicted protein [Paramuricea clavata] diamond 1272 57.4 0.993031358885017 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Plexauridae Paramuricea Paramuricea clavata
28843827 28843827 PRJNA408129_S_NODE_20108_length_178_cov_6.163121_g20090_i0 PRJNA408129 20108 178 6.163121 10.97035538 Hydra vulgaris 6087 Cnidaria other_Eukaryota 42.7 0.0158   NR XP_065652610.1 6087 g20090 i0 48.6 3.53932584269663 35 18 59 0 68 172 166 200 XP_065652610.1 uncharacterized protein LOC136079876 [Hydra vulgaris] diamond 630 42.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
28906927 28906927 PRJNA408129_S_NODE_11008_length_215_cov_7.230337_g10990_i0 PRJNA408129 11008 215 7.230337 15.54522455 Dendronephthya gigantea 151771 Cnidaria other_Eukaryota 42.4 0.0302   NR XP_028394409.1 151771 g10990 i0 33.8 0.906976744186046 65 43 90.7 0 198 4 153 217 XP_028394409.1 uncharacterized protein LOC114518589 [Dendronephthya gigantea] diamond 195 42.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Nephtheidae Dendronephthya Dendronephthya gigantea
28906931 28906931 PRJNA408129_S_NODE_22888_length_171_cov_6.044776_g22870_i0 PRJNA408129 22888 171 6.044776 10.33656696 Exaiptasia diaphana 2652724 Cnidaria other_Eukaryota 52.4 5.79e-6   NR KXJ08474.1 2652724 g22870 i0 54.3 0.807017543859649 46 21 80.7 0 153 16 397 442 KXJ08474.1 Uncharacterized protein K02A2.6, partial [Exaiptasia diaphana] diamond 138 52.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Aiptasiidae Exaiptasia Exaiptasia diaphana
28923656 28923656 PRJNA408129_S_NODE_7728_length_238_cov_4.238806_g7710_i0 PRJNA408129 7728 238 4.238806 10.08835828 Pocilloporidae 46729 Cnidaria other_Eukaryota 115 1.32e-29   NR RMX36968.1 46731 g7710 i0 70.4 2.68487394957983 71 21 89.5 0 228 16 173 243 RMX36968.1 hypothetical protein pdam_00005043 [Pocillopora damicornis] diamond 639 115 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Pocillopora Pocillopora damicornis
29317577 29317577 PRJNA408129_S_NODE_3849_length_286_cov_4.650602_g3831_i0 PRJNA408129 3849 286 4.650602 13.30072172 Paramuricea clavata 317549 Cnidaria other_Eukaryota 73.2 1.28e-12   NR CAB3994490.1 317549 g3831 i0 44.3 1.77272727272727 88 49 92.3 0 19 282 168 255 CAB3994490.1 DNA polymerase [Paramuricea clavata] diamond 507 73.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Plexauridae Paramuricea Paramuricea clavata
29365916 29365916 PRJNA408129_S_NODE_13669_length_201_cov_4.646341_g13651_i0 PRJNA408129 13669 201 4.646341 9.33914541 Metazoa 33208 Cnidaria other_Eukaryota 65.1 2.74e-10   NR XP_065654750.1 6087 g13651 i0 46.7 10.8805970149254 60 32 89.6 0 2 181 406 465 XP_065654750.1 zinc finger MYM-type protein 1-like [Hydra vulgaris] diamond 2187 65.5 0.993893129770992 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
29492096 29492096 PRJNA408129_S_NODE_21330_length_175_cov_3.297101_g21312_i0 PRJNA408129 21330 175 3.297101 5.76992675 Metazoa 33208 Cnidaria other_Eukaryota 50.8 1.77e-5   NR XP_065647926.1 6087 g21312 i0 48.6 2.43428571428571 35 18 60 0 67 171 199 233 XP_065647926.1 uncharacterized protein LOC136077150 [Hydra vulgaris] diamond 426 51.2 0.9921875 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
29601473 29601473 PRJNA408129_S_NODE_31990_length_155_cov_2.661017_g31972_i0 PRJNA408129 31990 155 2.661017 4.12457635 Exaiptasia diaphana 2652724 Cnidaria other_Eukaryota 41.2 0.0397   NR KXJ09041.1 2652724 g31972 i0 51.5 0.638709677419355 33 16 63.9 0 45 143 143 175 KXJ09041.1 hypothetical protein AC249_AIPGENE26933 [Exaiptasia diaphana] diamond 99 41.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Aiptasiidae Exaiptasia Exaiptasia diaphana
30423449 30423449 PRJNA408129_S_NODE_7393_length_241_cov_3.088235_g7375_i0 PRJNA408129 7393 241 3.088235 7.44264635 Montipora capricornis 246305 Cnidaria other_Eukaryota 44.7 0.00588   NR XP_068749352.1 246305 g7375 i0 65.6 0.398340248962656 32 11 39.8 0 47 142 178 209 XP_068749352.1 uncharacterized protein [Montipora capricornis] diamond 96 44.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Montipora Montipora capricornis
30439920 30439920 PRJNA408129_S_NODE_22793_length_172_cov_1.333333_g22775_i0 PRJNA408129 22793 172 1.333333 2.29333276 Metazoa 33208 Cnidaria other_Eukaryota 65.1 1.88e-10   NR CAH3196018.1 104178 g22775 i0 89.2 12.1046511627907 37 4 64.5 0 160 50 96 132 CAH3196018.1 unnamed protein product, partial [Porites evermanni] diamond 2082 65.1 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Poritidae Porites Porites evermanni
30549407 30549407 PRJNA408129_S_NODE_19633_length_180_cov_1.867133_g19615_i0 PRJNA408129 19633 180 1.867133 3.3608394 Montipora capricornis 246305 Cnidaria other_Eukaryota 45.8 0.00135   NR XP_068720538.1 246305 g19615 i0 54.1 1.88333333333333 37 17 61.7 0 67 177 294 330 XP_068720538.1 uncharacterized protein C17orf113-like [Montipora capricornis] diamond 339 45.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Montipora Montipora capricornis
31149344 31149344 PRJNA408129_S_NODE_1035_length_383_cov_21.661850_g1017_i0 PRJNA408129 1035 383 21.66185 82.9648855 Rhopilema esculentum 499914 Cnidaria other_Eukaryota 44.7 0.0377   NR XP_065070248.1 499914 g1017 i0 39.3 0.438642297650131 56 34 43.9 0 175 8 1279 1334 XP_065070248.1 glycogen debranching enzyme-like [Rhopilema esculentum] diamond 168 44.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Scyphozoa Rhizostomeae Rhizostomatidae Rhopilema Rhopilema esculentum
31181071 31181071 PRJNA408129_S_NODE_6255_length_251_cov_6.191589_g6237_i0 PRJNA408129 6255 251 6.191589 15.54088839 Paramuricea clavata 317549 Cnidaria other_Eukaryota 98.2 9.69e-22   NR CAB4016997.1 317549 g6237 i0 56.6 4.91235059760956 83 36 99.2 0 251 3 374 456 CAB4016997.1 Hypothetical predicted protein [Paramuricea clavata] diamond 1233 98.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Plexauridae Paramuricea Paramuricea clavata
31229429 31229429 PRJNA408129_S_NODE_10215_length_220_cov_4.377049_g10197_i0 PRJNA408129 10215 220 4.377049 9.6295078 Scleractinia 6125 Cnidaria other_Eukaryota 54.7 1.59e-6   NR CAH3107083.1 46732 g10197 i0 36.2 5.64545454545455 69 43 92.7 1 216 13 198 266 CAH3107083.1 unnamed protein product, partial [Pocillopora meandrina] diamond 1242 55.1 0.992740471869329 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Pocillopora Pocillopora meandrina
32288908 32288908 PRJNA408129_S_NODE_1659_length_347_cov_8.054839_g1641_i0 PRJNA408129 1659 347 8.054839 27.95029133 Acropora millepora 45264 Cnidaria other_Eukaryota 54.3 1.04e-5   NR XP_044163394.1 45264 g1641 i0 38.8 0.579250720461095 67 41 57.9 0 117 317 1 67 XP_044163394.1 uncharacterized protein LOC122947848 [Acropora millepora] diamond 201 54.3 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora millepora
32415228 32415228 PRJNA408129_S_NODE_16979_length_188_cov_2.463576_g16961_i0 PRJNA408129 16979 188 2.463576 4.63152288 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 65.1 2.33e-10   NR XP_066919861.1 252671 g16961 i0 52.6 1.81914893617021 57 27 91 0 15 185 547 603 XP_066919861.1 NADPH-dependent diflavin oxidoreductase 1-like [Clytia hemisphaerica] diamond 342 65.1 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;