RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA408129" and tax_phylum = "Candidatus Melainabacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA408129 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30612517 30612517 PRJNA408129_S_NODE_25253_length_166_cov_4.627907_g25235_i0 PRJNA408129 25253 166 4.627907 7.68232562 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 77.4 7.41e-15   NR MDZ4834118.1 2052166 g25235 i0 71.4 0.885542168674699 49 14 88.6 0 3 149 363 411 MDZ4834118.1 serine/threonine-protein kinase [Candidatus Melainabacteria bacterium] diamond 147 77.4 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
31561088 31561088 PRJNA408129_S_NODE_27376_length_162_cov_5.336000_g27358_i0 PRJNA408129 27376 162 5.336 8.64432 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 80.5 4.51e-16   NR MDZ4836864.1 2052166 g27358 i0 77.1 0.888888888888889 48 10 87 1 144 4 53 100 MDZ4836864.1 DNA repair exonuclease [Candidatus Melainabacteria bacterium] diamond 144 80.5 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;