RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA408129" and tax_phylum = "Bacillariophyta"

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tax_superkingdom 1

tax_phylum 1

  • Bacillariophyta · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA408129 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30960284 30960284 PRJNA408129_S_NODE_7274_length_242_cov_2.814634_g7256_i0 PRJNA408129 7274 242 2.814634 6.81141428 Mayamaea pseudoterrestris 2872254 SAR_Eukaryotes SAR_Eukaryotes 83.2 1.36e-18   NR GKY91156.1 2872254 g7256 i0 95.2 0.520661157024793 42 2 52.1 0 240 115 63 104 GKY91156.1 hypothetical protein MPSEU_000088400 [Mayamaea pseudoterrestris] diamond 126 83.2 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Naviculaceae Mayamaea Mayamaea pseudoterrestris
31244557 31244557 PRJNA408129_S_NODE_25655_length_165_cov_6.937500_g25637_i0 PRJNA408129 25655 165 6.9375 11.446875 Nitzschia inconspicua 303405 SAR_Eukaryotes SAR_Eukaryotes 66.2 1.58e-11   NR KAG7356920.1 303405 g25637 i0 96.9 0.581818181818182 32 1 58.2 0 160 65 167 198 KAG7356920.1 chlorophyll A-B binding protein [Nitzschia inconspicua] diamond 96 66.2 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Nitzschia Nitzschia inconspicua

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;