RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA408129", tax_kingdom = "Fungi" and tax_phylum = "Mucoromycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 7 ✖

tax_kingdom 1

  • Fungi · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA408129 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
418401 418401 PRJNA408129_S_NODE_22881_length_171_cov_6.388060_g22863_i0 PRJNA408129 22881 171 6.38806 10.9235826 Cokeromyces recurvatus 90255 Fungi Fungi 97.1 6.52e-16   NTclustered gi|2324066342|ref|XM_051530812.1| 90255 g22863 i0 90.411 1.70175438596491 73 7 43 0 19 91 521 593 Cokeromyces recurvatus ribosomal protein L23/L15e core domain-containing protein (BX663DRAFT_542347), partial mRNA blastn 291 97.1 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Cokeromyces Cokeromyces recurvatus
28260571 28260571 PRJNA408129_S_NODE_12926_length_205_cov_2.517857_g12908_i0 PRJNA408129 12926 205 2.517857 5.16160685 Mucorales 4827 Fungi Fungi 70.5 3.61e-12   NR KAI8368735.1 4850 g12908 i0 93.8 4.21463414634146 32 2 46.8 0 196 101 396 427 KAI8368735.1 ornithine decarboxylase [Blakeslea trispora] diamond 864 70.5 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Choanephoraceae Blakeslea Blakeslea trispora
28734433 28734433 PRJNA408129_S_NODE_13767_length_201_cov_2.146341_g13749_i0 PRJNA408129 13767 201 2.146341 4.31414541 Rhizopus 4842 Fungi Fungi 60.5 1.19e-8   NR KAG1406439.1 64495 g13749 i0 96.7 1.7910447761194 30 1 44.8 0 199 110 1655 1684 KAG1406439.1 hypothetical protein G6F60_002928 [Rhizopus arrhizus] diamond 360 60.5 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus arrhizus
30455052 30455052 PRJNA408129_S_NODE_5233_length_264_cov_2.603524_g5215_i0 PRJNA408129 5233 264 2.603524 6.87330336 Paraglomus occultum 144539 Fungi Fungi 47 0.00147   NR CAG8652198.1 144539 g5215 i0 43.6 0.954545454545455 39 22 44.3 0 242 126 212 250 CAG8652198.1 6816_t:CDS:1 [Paraglomus occultum] diamond 252 47 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Paraglomerales Paraglomeraceae Paraglomus Paraglomus occultum
31103122 31103122 PRJNA408129_S_NODE_23455_length_170_cov_3.308271_g23437_i0 PRJNA408129 23455 170 3.308271 5.6240607 Fungi 4751 Fungi Fungi 75.5 4.82e-15   NR KAI8368946.1 4850 g23437 i0 84.2 3.35294117647059 38 6 67.1 0 169 56 160 197 KAI8368946.1 emp24/gp25L/p24 family/GOLD-domain-containing protein [Blakeslea trispora] diamond 570 75.9 0.994729907773386 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Choanephoraceae Blakeslea Blakeslea trispora
31402925 31402925 PRJNA408129_S_NODE_24976_length_167_cov_2.238462_g24958_i0 PRJNA408129 24976 167 2.238462 3.73823154 Sporodiniella umbellata 101117 Fungi Fungi 45.8 0.00107   NR KAI9257639.1 101117 g24958 i0 52.9 0.610778443113772 34 16 61.1 0 165 64 241 274 KAI9257639.1 hypothetical protein BY458DRAFT_518794 [Sporodiniella umbellata] diamond 102 45.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Sporodiniella Sporodiniella umbellata
32527010 32527010 PRJNA408129_S_NODE_16779_length_188_cov_9.569536_g16761_i0 PRJNA408129 16779 188 9.569536 17.99072768 Fungi 4751 Fungi Fungi 44.7 0.00116   NR KAG0250048.1 41804 g16761 i0 79.3 2.31382978723404 29 6 46.3 0 187 101 90 118 KAG0250048.1 translation elongation factor EF-1 alpha, partial [Mortierella polycephala] diamond 435 45.1 0.991130820399113 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Mortierella Mortierella polycephala

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;