RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA408129", tax_kingdom = "Fungi" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA408129 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27138313 27138313 PRJNA408129_S_NODE_14442_length_198_cov_2.173913_g14424_i0 PRJNA408129 14442 198 2.173913 4.30434774 Edhazardia aedis USNM 41457 1003232 Fungi Fungi 59.3 1.98e-8   NR EJW04476.1 1003232 g14424 i0 62.2 0.681818181818182 45 17 68.2 0 19 153 198 242 EJW04476.1 ribosomal protein S4 [Edhazardia aedis USNM 41457] diamond 135 59.3 1 Eukaryota Opisthokonta Fungi Microsporidia     Culicosporidae Edhazardia Edhazardia aedis
27928376 27928376 PRJNA408129_S_NODE_13185_length_203_cov_11.638554_g13167_i0 PRJNA408129 13185 203 11.638554 23.62626462 Mitosporidium daphniae 1485682 Fungi Fungi 42.4 0.0304   NR XP_013237841.1 1485682 g13167 i0 40.8 0.724137931034483 49 28 70.9 1 29 172 3 51 XP_013237841.1 uncharacterized protein DI09_36p80 [Mitosporidium daphniae] diamond 147 42.4 1 Eukaryota Opisthokonta Fungi Microsporidia       Mitosporidium Mitosporidium daphniae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;