RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA408129" and tax_kingdom = "Bamfordvirae"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Bamfordvirae · 4 ✖

bioproject 1

  • PRJNA408129 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5522126 5522126 PRJNA408129_S_NODE_15265_length_194_cov_4.974522_g15247_i0 PRJNA408129 15265 194 4.974522 9.65057268 Megaviridae environmental sample 1737588 Viruses Viruses 52.8 0.017   NTclustered gi|1758106386|gb|MN448274.1| 1737588 g15247 i0 100 0.144329896907216 28 0 14 0 44 71 48530 48503 MAG: Megaviridae environmental sample isolate oPacV-662 clone oPacV-662_c2 blastn 28 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Megaviridae environmental sample
16995827 16995827 PRJNA408129_S_NODE_19634_length_180_cov_1.860140_g19616_i0 PRJNA408129 19634 180 1.86014 3.348252 Theiavirus salishense 3060737 Viruses Viruses 65.8 1.96e-6   NTclustered gi|2500354595|ref|NC_075036.1| 2024608 g19616 i0 97.368 1.76111111111111 38 1 21 0 17 54 235766 235729 Bodo saltans virus strain NG1, complete genome blastn 317 65.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Theiavirus Theiavirus salishense
29475189 29475189 PRJNA408129_S_NODE_29810_length_158_cov_3.809917_g29792_i0 PRJNA408129 29810 158 3.809917 6.01966886 Moumouvirus maliensis 2682469 Viruses Viruses 42 0.0224   NR QGR53984.1 2682469 g29792 i0 39.5 0.721518987341772 38 23 72.2 0 23 136 182 219 QGR53984.1 RNA helicase [Moumouvirus maliensis] diamond 114 42 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Moumouvirus Moumouvirus sp. 'maliensis'
30391964 30391964 PRJNA408129_S_NODE_3713_length_289_cov_2.456349_g3695_i0 PRJNA408129 3713 289 2.456349 7.09884861 Adintovirus anguilla10665 3115889 Viruses Viruses 69.3 3.84e-12   NR DBA49783.1 3115889 g3695 i0 36.8 0.986159169550173 95 53 91.3 2 3 266 59 153 DBA49783.1 MAG TPA_asm: Adenain [Adintovirus anguilla10665] diamond 285 69.3 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus anguilla10665

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;