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contig_metadata

3 rows where bioproject = "PRJNA408129", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA408129 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
418439 418439 PRJNA408129_S_NODE_2761_length_310_cov_11.073260_g2743_i0 PRJNA408129 2761 310 11.07326 34.327106 Eimeria necatrix 51315 SAR_Eukaryotes SAR_Eukaryotes 60.2 1.73e-4   NTclustered gi|921131233|ref|XM_013584698.1| 51315 g2743 i0 97.143 0.112903225806452 35 1 11 0 115 149 1443 1477 Eimeria necatrix hypothetical protein, conserved partial mRNA blastn 35 60.2 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria necatrix
1082700 1082700 PRJNA408129_S_NODE_13821_length_200_cov_14.601227_g13803_i0 PRJNA408129 13821 200 14.601227 29.202454 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 342 9.209999999999999e-90   NTclustered gi|2792507|gb|AF042107.1| 5802 g13803 i0 98.958 91.385 192 1 96 1 1 191 847 656 Eimeria tenella ribosomal protein S3a mRNA, complete cds blastn 18277 342 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
22759734 22759734 PRJNA408129_S_NODE_27958_length_161_cov_5.766129_g27940_i0 PRJNA408129 27958 161 5.766129 9.28346769 root 1 Root_unresolved Root_unresolved 235 1.24e-57   NTclustered gi|833494852|ref|XM_012915026.1| 5866 g27940 i0 96.503 133.540372670807 143 3 89 2 5 147 46 186 Babesia bigemina hypothetical protein, conserved partial mRNA blastn 21500 235 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bigemina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;