contig_metadata
7 rows where bioproject = "PRJNA408129" and tax_clade = "Bacteria candidate phyla"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26885902 | 26885902 | PRJNA408129_S_NODE_21521_length_175_cov_1.521739_g21503_i0 | PRJNA408129 | 21521 | 175 | 1.521739 | 2.66304325 | Candidatus Wallbacteria bacterium | 2053640 | Bacteria | Bacteria | 42.4 | 0.0208 | NR | MDD2716402.1 | 2053640 | g21503 | i0 | 46.8 | 0.805714285714286 | 47 | 25 | 80.6 | 0 | 163 | 23 | 156 | 202 | MDD2716402.1 glycosyltransferase family 39 protein [Candidatus Wallbacteria bacterium] | diamond | 141 | 42.4 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Walliibacteriota | Candidatus Wallbacteria bacterium | ||||||
| 27517944 | 27517944 | PRJNA408129_S_NODE_7163_length_243_cov_3.213592_g7145_i0 | PRJNA408129 | 7163 | 243 | 3.213592 | 7.80902856 | Candidatus Altimarinota bacterium | 2044595 | Bacteria | Bacteria | 44.7 | 0.00641 | NR | MDP5038834.1 | 2044595 | g7145 | i0 | 53.1 | 0.790123456790123 | 32 | 15 | 39.5 | 0 | 124 | 29 | 12 | 43 | MDP5038834.1 rRNA pseudouridine synthase [Candidatus Altimarinota bacterium] | diamond | 192 | 44.7 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Altimarinota | Candidatus Altimarinota bacterium | ||||||
| 27991644 | 27991644 | PRJNA408129_S_NODE_24705_length_167_cov_6.053846_g24687_i0 | PRJNA408129 | 24705 | 167 | 6.053846 | 10.10992282 | Candidatus Saccharimonas sp. | 1917697 | Bacteria | Bacteria | 41.6 | 0.0349 | NR | RKV98313.1 | 1917697 | g24687 | i0 | 44.2 | 0.934131736526946 | 52 | 26 | 88 | 1 | 163 | 17 | 379 | 430 | RKV98313.1 MAG: hypothetical protein D8G53_03085 [Candidatus Saccharimonas sp.] | diamond | 156 | 41.6 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadia | Candidatus Saccharimonadales | Candidatus Saccharimonadaceae | Candidatus Saccharimonas | Candidatus Saccharimonas sp. | ||
| 28023177 | 28023177 | PRJNA408129_S_NODE_19965_length_179_cov_2.253521_g19947_i0 | PRJNA408129 | 19965 | 179 | 2.253521 | 4.03380259 | Candidatus Saccharimonadota bacterium | 2026720 | Bacteria | Bacteria | 102 | 2.07e-23 | NR | MBH2007265.1 | 2026720 | g19947 | i0 | 79.7 | 1.97765363128492 | 59 | 12 | 98.9 | 0 | 1 | 177 | 430 | 488 | MBH2007265.1 leucine--tRNA ligase [Candidatus Saccharibacteria bacterium] | diamond | 354 | 102 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadota bacterium | ||||||
| 29570101 | 29570101 | PRJNA408129_S_NODE_7070_length_244_cov_2.628019_g7052_i0 | PRJNA408129 | 7070 | 244 | 2.628019 | 6.41236636 | Candidatus Altimarinota bacterium | 2044595 | Bacteria | Bacteria | 122 | 4.97e-30 | NR | MFA6079892.1 | 2044595 | g7052 | i0 | 93.8 | 0.786885245901639 | 64 | 4 | 78.7 | 0 | 193 | 2 | 280 | 343 | MFA6079892.1 ATP-dependent DNA helicase [Candidatus Altimarinota bacterium] | diamond | 192 | 122 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Altimarinota | Candidatus Altimarinota bacterium | ||||||
| 30960275 | 30960275 | PRJNA408129_S_NODE_12854_length_205_cov_4.880952_g12836_i0 | PRJNA408129 | 12854 | 205 | 4.880952 | 10.0059516 | Candidatus Saccharimonadales bacterium | 2973664 | Bacteria | Bacteria | 47.4 | 3.13e-5 | NR | HET8709174.1 | 2973664 | g12836 | i0 | 79.4 | 0.497560975609756 | 34 | 6 | 49.8 | 1 | 184 | 83 | 3 | 35 | HET8709174.1 hypothetical protein [Candidatus Saccharimonadales bacterium] | diamond | 102 | 47.4 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadia | Candidatus Saccharimonadales | Candidatus Saccharimonadales bacterium | ||||
| 32856589 | 32856589 | PRJNA408129_S_NODE_5520_length_260_cov_4.210762_g5502_i0 | PRJNA408129 | 5520 | 260 | 4.210762 | 10.9479812 | Candidatus Collierbacteria bacterium RIFCSPHIGHO2_ | 2053540 | Bacteria | Bacteria | 41.6 | 0.0311 | NR | OGD71529.1 | 1817723 | g5502 | i0 | 47.4 | 0.438461538461538 | 38 | 20 | 43.8 | 0 | 147 | 260 | 24 | 61 | OGD71529.1 MAG: hypothetical protein A3D09_02205 [Candidatus Collierbacteria bacterium RIFCSPHIGHO2_02_FULL_49_10] | diamond | 114 | 41.6 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Collieribacteriota | Candidatus Collierbacteria bacterium RIFCSPHIGHO2_02_FULL_49_10 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;