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contig_metadata

11 rows where bioproject = "PRJNA408129" and tax_clade = "Amoebozoa"

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tax_phylum 3

analysis 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 11 ✖

bioproject 1

  • PRJNA408129 · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
418376 418376 PRJNA408129_S_NODE_20741_length_177_cov_1.807143_g20723_i0 PRJNA408129 20741 177 1.807143 3.19864311 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 127 8.689999999999999e-37   NR PRP82119.1 1890364 g20723 i0 100 1 59 0 100 0 1 177 18 76 PRP82119.1 hypothetical protein PROFUN_10327 [Planoprotostelium fungivorum] diamond 177 127 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
1693164 1693164 PRJNA408129_S_NODE_11422_length_213_cov_4.039773_g11404_i0 PRJNA408129 11422 213 4.039773 8.60471649 Dictyostelium discoideum 44689 Evosea other_Eukaryota 58.4 4.03e-4   NTclustered gi|66807038|ref|XM_632150.1| 352472 g11404 i0 97.143 0.450704225352113 35 0 16 1 154 188 951 984 Dictyostelium discoideum AX4 hypothetical protein (DDB_G0287331) mRNA, complete cds blastn 96 58.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
22759757 22759757 PRJNA408129_S_NODE_4278_length_279_cov_2.289256_g4260_i0 PRJNA408129 4278 279 2.289256 6.38702424 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 396 1.03e-105   NTclustered gi|399764275|gb|JQ271786.1| 1215995 g4260 i0 92.754 13.9749103942652 276 16 97 3 7 278 197 472 Tubulinea group 04 sp. CAL5 18S ribosomal RNA gene, partial sequence blastn 3899 396 1 Eukaryota Amoebozoa   Tubulinea         Tubulinea group 04 sp. CAL5
23370607 23370607 PRJNA408129_S_NODE_3959_length_284_cov_5.336032_g3941_i0 PRJNA408129 3959 284 5.336032 15.15433088 Clydonella sp. ATCC 50884 218662 Discosea other_Eukaryota 91.6 5.56e-14   NTclustered gi|27803578|gb|AY183892.1| 218662 g3941 i0 76.97 28.5140845070423 165 34 58 3 74 237 892 1053 Clydonella sp. ATCC 50884 small subunit ribosomal RNA gene, complete sequence blastn 8098 91.6 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Clydonella Clydonella sp. ATCC 50884
28938850 28938850 PRJNA408129_S_NODE_22928_length_171_cov_4.507463_g22910_i0 PRJNA408129 22928 171 4.507463 7.70776173 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 44.3 0.00393   NR PRP78226.1 1890364 g22910 i0 78.3 0.807017543859649 23 5 40.4 0 142 74 62 84 PRP78226.1 hypothetical protein PROFUN_13979 [Planoprotostelium fungivorum] diamond 138 44.3 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
29285905 29285905 PRJNA408129_S_NODE_32589_length_154_cov_4.025641_g32571_i0 PRJNA408129 32589 154 4.025641 6.19948714 Dictyostelium discoideum 44689 Evosea other_Eukaryota 48.1 8.03e-5   NR AAG45116.1 44689 g32571 i0 63.9 0.701298701298701 36 12 70.1 1 2 109 146 180 AAG45116.1 RacB, partial [Dictyostelium discoideum] diamond 108 48.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
31687348 31687348 PRJNA408129_S_NODE_15957_length_192_cov_1.000000_g15939_i0 PRJNA408129 15957 192 1 1.92 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 103 1.43e-24   NR PRP82884.1 1890364 g15939 i0 82 0.953125 61 11 95.3 0 3 185 270 330 PRP82884.1 3-hydroxyisobutyrate dehydrogenase [Planoprotostelium fungivorum] diamond 183 103 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
32130517 32130517 PRJNA408129_S_NODE_24138_length_169_cov_1.462121_g24120_i0 PRJNA408129 24138 169 1.462121 2.47098449 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 52 7.09e-6   NR PRP80397.1 1890364 g24120 i0 63.4 0.727810650887574 41 14 72.8 1 167 45 309 348 PRP80397.1 hypothetical protein PROFUN_11943 [Planoprotostelium fungivorum] diamond 123 52 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
32415227 32415227 PRJNA408129_S_NODE_15139_length_195_cov_2.341772_g15121_i0 PRJNA408129 15139 195 2.341772 4.5664554 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 85.5 3.29e-19   NR PRP80753.1 1890364 g15121 i0 61.9 0.969230769230769 63 24 96.9 0 193 5 93 155 PRP80753.1 hypothetical protein PROFUN_11493 [Planoprotostelium fungivorum] diamond 189 85.5 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
32636018 32636018 PRJNA408129_S_NODE_12620_length_207_cov_1.752941_g12602_i0 PRJNA408129 12620 207 1.752941 3.62858787 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 123 1.14e-30   NR PRP84152.1 1890364 g12602 i0 83.9 0.898550724637681 62 10 89.9 0 188 3 1547 1608 PRP84152.1 hypothetical protein PROFUN_04143 [Planoprotostelium fungivorum] diamond 186 123 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
32667629 32667629 PRJNA408129_S_NODE_16520_length_189_cov_6.651316_g16502_i0 PRJNA408129 16520 189 6.651316 12.57098724 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 103 2.61e-24   NR PRP82034.1 1890364 g16502 i0 100 0.80952380952381 51 0 81 0 178 26 360 410 PRP82034.1 hypothetical protein PROFUN_03724 [Planoprotostelium fungivorum] diamond 153 103 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;