RNAquarium Metadata Server
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contig_metadata

14 rows where bioproject = "PRJNA407886", tax_phylum = "Chloroflexota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 14 ✖

tax_phylum 1

  • Chloroflexota · 14 ✖

tax_kingdom 1

bioproject 1

  • PRJNA407886 · 14 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1692262 1692262 PRJNA407886_P_NODE_41922_length_337_cov_1.102273_g40228_i0 PRJNA407886 41922 337 1.102273 3.71466001 Phototrophicaceae bacterium 3069543 Bacteria Bacteria 52.8 0.032   NTclustered gi|2893358443|emb|OZ220735.1| 3069543 g40228 i0 100 0.0830860534124629 28 0 8 0 159 186 2226432 2226459 MAG: Phototrophicaceae bacterium isolate 252cb3c6-93c9-4785-98a9-44529c25b936 genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria   Bacillati Chloroflexota Candidatus Thermofontia Phototrophicales Phototrophicaceae   Phototrophicaceae bacterium
15720754 15720754 PRJNA407886_P_NODE_74933_length_247_cov_0.885057_g73239_i0 PRJNA407886 74933 247 0.885057 2.18609079 Candidatus Limnocylindrales bacterium 2952938 Bacteria Bacteria 61.6 1.55e-9   NR MEO8626088.1 2952938 g73239 i0 43.1 0.874493927125506 72 37 87.4 1 243 28 96 163 MEO8626088.1 copper resistance CopC family protein [Candidatus Limnocylindrales bacterium] diamond 216 61.6 1 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria Candidatus Limnocylindrales     Candidatus Limnocylindrales bacterium
26980534 26980534 PRJNA407886_P_NODE_71302_length_250_cov_0.870056_g69608_i0 PRJNA407886 71302 250 0.870056 2.17514 Anaerolineae bacterium 2052143 Bacteria Bacteria 72 1.11e-12   NR MCC7354188.1 2052143 g69608 i0 52.3 1.548 65 28 76.8 3 194 3 233 295 MCC7354188.1 hypothetical protein [Anaerolineae bacterium] diamond 387 72 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
27360108 27360108 PRJNA407886_P_NODE_44843_length_324_cov_1.474104_g43149_i0 PRJNA407886 44843 324 1.474104 4.77609696 Chloroflexota bacterium 2026724 Bacteria Bacteria 47.8 0.00162   NR MEW5985999.1 2026724 g43149 i0 36 1.61111111111111 89 56 82.4 1 267 1 23 110 MEW5985999.1 S8 family serine peptidase [Chloroflexota bacterium] diamond 522 47.8 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
28481793 28481793 PRJNA407886_P_NODE_73126_length_248_cov_0.880000_g71432_i0 PRJNA407886 73126 248 0.88 2.1824 Chloroflexota 200795 Bacteria Bacteria 95.5 2.13e-21   NR HZQ08140.1 2052143 g71432 i0 57.3 2.96370967741935 82 34 99.2 1 2 247 69 149 HZQ08140.1 glycosyltransferase family 4 protein [Anaerolineae bacterium] diamond 735 95.9 0.995828988529718 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
29412218 29412218 PRJNA407886_P_NODE_60409_length_273_cov_1.540000_g58715_i0 PRJNA407886 60409 273 1.54 4.2042 Thermoflexales bacterium 2497639 Bacteria Bacteria 105 4.63e-24   NR MBX7213414.1 2497639 g58715 i0 55.8 0.945054945054945 86 36 92.3 1 268 17 819 904 MBX7213414.1 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme [Thermoflexales bacterium] diamond 258 105 1 Bacteria   Bacillati Chloroflexota Thermoflexia Thermoflexales     Thermoflexales bacterium
29980763 29980763 PRJNA407886_P_NODE_66891_length_257_cov_1.673913_g65197_i0 PRJNA407886 66891 257 1.673913 4.30195641 Aggregatilineales bacterium 2952883 Bacteria Bacteria 48.9 3.06e-4   NR HUN07214.1 2952883 g65197 i0 35.4 0.957198443579767 82 52 95.7 1 252 7 570 650 HUN07214.1 VWA domain-containing protein [Aggregatilineales bacterium] diamond 246 48.9 1 Bacteria   Bacillati Chloroflexota Anaerolineae Aggregatilineales     Aggregatilineales bacterium
30881985 30881985 PRJNA407886_P_NODE_38454_length_355_cov_1.443262_g36760_i0 PRJNA407886 38454 355 1.443262 5.1235801 Bacteria 2 Bacteria Bacteria 117 4.53e-29   NR MDE2785175.1 2026724 g36760 i0 43.2 9.88732394366197 118 67 99.7 0 354 1 125 242 MDE2785175.1 polyamine aminopropyltransferase [Chloroflexota bacterium] diamond 3510 117 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
31023368 31023368 PRJNA407886_P_NODE_28195_length_436_cov_2.545455_g26502_i0 PRJNA407886 28195 436 2.545455 11.0981838 Anaerolineae bacterium 2052143 Bacteria Bacteria 57.4 2.22e-7   NR MCW5848612.1 2052143 g26502 i0 42.5 0.598623853211009 87 48 59.2 2 13 270 39 124 MCW5848612.1 profilin [Anaerolineae bacterium] diamond 261 57.4 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
31529365 31529365 PRJNA407886_P_NODE_17236_length_643_cov_1.591228_g15574_i0 PRJNA407886 17236 643 1.591228 10.23159604 Caldilineaceae bacterium 2614250 Bacteria Bacteria 52.4 6.53e-4   NR MBX2997503.1 2614250 g15574 i0 30.9 0.816485225505443 175 104 77 9 582 88 262 429 MBX2997503.1 DUF11 domain-containing protein [Caldilineaceae bacterium] diamond 525 52.4 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae   Caldilineaceae bacterium
31782077 31782077 PRJNA407886_P_NODE_33197_length_390_cov_2.829653_g31503_i0 PRJNA407886 33197 390 2.829653 11.0356467 Thermoflexales bacterium 2497639 Bacteria Bacteria 50.4 1.05e-4   NR MBP7690251.1 2497639 g31503 i0 39.2 0.784615384615385 102 56 78.5 2 375 70 54 149 MBP7690251.1 SRPBCC family protein [Thermoflexales bacterium] diamond 306 50.4 1 Bacteria   Bacillati Chloroflexota Thermoflexia Thermoflexales     Thermoflexales bacterium
32115449 32115449 PRJNA407886_P_NODE_38078_length_357_cov_1.401408_g36384_i0 PRJNA407886 38078 357 1.401408 5.00302656 Bacteria 2 Bacteria Bacteria 87 4.43e-18   NR MFC1913912.1 2026724 g36384 i0 43.7 9.73109243697479 103 50 86.6 1 8 316 140 234 MFC1913912.1 MIP family channel protein [Chloroflexota bacterium] diamond 3474 87 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
32162098 32162098 PRJNA407886_P_NODE_53218_length_294_cov_1.045249_g51524_i0 PRJNA407886 53218 294 1.045249 3.07303206 Chloroflexaceae bacterium 2562117 Bacteria Bacteria 43.1 0.0486   NR MFP4441253.1 2562117 g51524 i0 34.1 0.897959183673469 88 44 79.6 4 288 55 290 373 MFP4441253.1 WGR domain-containing protein [Chloroflexaceae bacterium] diamond 264 43.1 1 Bacteria   Bacillati Chloroflexota Chloroflexia Chloroflexales Chloroflexaceae   Chloroflexaceae bacterium
32699083 32699083 PRJNA407886_P_NODE_73340_length_248_cov_0.880000_g71646_i0 PRJNA407886 73340 248 0.88 2.1824 Anaerolineales bacterium 2073117 Bacteria Bacteria 94 2.68e-20   NR HKZ69802.1 2073117 g71646 i0 66.7 0.798387096774194 66 22 79.8 0 203 6 4 69 HKZ69802.1 aspartate aminotransferase family protein [Anaerolineales bacterium] diamond 198 94 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;