contig_metadata
5 rows where bioproject = "PRJNA407886" and tax_phylum = "Chlamydiota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27233569 | 27233569 | PRJNA407886_P_NODE_46963_length_315_cov_2.520661_g45269_i0 | PRJNA407886 | 46963 | 315 | 2.520661 | 7.94008215 | Chlamydiales bacterium | 2047757 | Bacteria | Bacteria | 165 | 5.030000000000001e-50 | NR | MCP5470421.1 | 2047757 | g45269 | i0 | 82.8 | 1.77142857142857 | 93 | 16 | 88.6 | 0 | 314 | 36 | 29 | 121 | MCP5470421.1 hypothetical protein [Chlamydiales bacterium] | diamond | 558 | 165 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium | |||
| 30391951 | 30391951 | PRJNA407886_P_NODE_79913_length_242_cov_1.585799_g78219_i0 | PRJNA407886 | 79913 | 242 | 1.585799 | 3.83763358 | Chlamydiales bacterium | 2047757 | Bacteria | Bacteria | 41.2 | 0.0491 | NR | MCH9608555.1 | 2047757 | g78219 | i0 | 26.7 | 0.743801652892562 | 60 | 44 | 74.4 | 0 | 62 | 241 | 50 | 109 | MCH9608555.1 hypothetical protein [Chlamydiales bacterium] | diamond | 180 | 41.2 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium | |||
| 30928671 | 30928671 | PRJNA407886_P_NODE_52034_length_297_cov_1.803571_g50340_i0 | PRJNA407886 | 52034 | 297 | 1.803571 | 5.35660587 | Chlamydiales bacterium | 2047757 | Bacteria | Bacteria | 69.7 | 1.85e-12 | NR | MCP5470420.1 | 2047757 | g50340 | i0 | 77.2 | 0.575757575757576 | 57 | 12 | 57.6 | 1 | 241 | 71 | 91 | 146 | MCP5470420.1 ribosomal protein L24e family protein [Chlamydiales bacterium] | diamond | 171 | 69.7 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium | |||
| 32130471 | 32130471 | PRJNA407886_P_NODE_36698_length_365_cov_3.917808_g35004_i0 | PRJNA407886 | 36698 | 365 | 3.917808 | 14.2999992 | Chlamydiales bacterium | 2047757 | Bacteria | Bacteria | 137 | 1.19e-38 | NR | MCP5470420.1 | 2047757 | g35004 | i0 | 75 | 0.887671232876712 | 108 | 27 | 88.8 | 0 | 363 | 40 | 49 | 156 | MCP5470420.1 ribosomal protein L24e family protein [Chlamydiales bacterium] | diamond | 324 | 137 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium | |||
| 32415196 | 32415196 | PRJNA407886_P_NODE_43079_length_331_cov_3.120155_g41385_i0 | PRJNA407886 | 43079 | 331 | 3.120155 | 10.32771305 | Simkania sp. | 34094 | Bacteria | Bacteria | 115 | 3.299999999999999e-29 | NR | MCB1084310.1 | 34094 | g41385 | i0 | 69.1 | 0.734138972809668 | 81 | 25 | 73.4 | 0 | 326 | 84 | 92 | 172 | MCB1084310.1 hypothetical protein [Simkania sp.] | diamond | 243 | 115 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Simkaniaceae | Simkania | Simkania sp. |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;