RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA407886" and tax_kingdom = "Nanobdellati"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Nanobdellati · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA407886 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27012181 27012181 PRJNA407886_P_NODE_62402_length_268_cov_1.394872_g60708_i0 PRJNA407886 62402 268 1.394872 3.73825696 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 89 2.8e-18   NR MEM1535065.1 2026773 g60708 i0 51.2 0.962686567164179 86 42 96.3 0 264 7 344 429 MEM1535065.1 glutamine--fructose-6-phosphate transaminase (isomerizing) [Candidatus Pacearchaeota archaeon] diamond 258 89 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
27802168 27802168 PRJNA407886_P_NODE_37064_length_363_cov_1.951724_g35370_i0 PRJNA407886 37064 363 1.951724 7.08475812 Nanobdellota archaeon 2026764 Archaea Archaea 150 2.03e-39   NR MCA9485224.1 2026764 g35370 i0 55.8 0.991735537190083 120 53 99.2 0 2 361 222 341 MCA9485224.1 GTP-binding protein [Nanoarchaeota archaeon] diamond 360 150 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
29492091 29492091 PRJNA407886_P_NODE_75150_length_246_cov_1.780347_g73456_i0 PRJNA407886 75150 246 1.780347 4.37965362 Nanobdellati 1783276 Archaea Archaea 56.2 6.64e-7   NR HIQ49859.1 2026764 g73456 i0 51 3.86585365853659 51 25 62.2 0 202 50 534 584 HIQ49859.1 glutamine--fructose-6-phosphate transaminase (isomerizing) [Nanoarchaeota archaeon] diamond 951 56.6 0.992932862190813 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;