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contig_metadata

7 rows where bioproject = "PRJNA407886" and tax_kingdom = "Methanobacteriati"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA407886 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4244899 4244899 PRJNA407886_P_NODE_62324_length_268_cov_1.579487_g60630_i0 PRJNA407886 62324 268 1.579487 4.23302516 Halomontanus rarus 3034020 Archaea Archaea 52.8 0.025   NTclustered gi|2006565477|gb|CP071597.1| 3034020 g60630 i0 100 0.104477611940299 28 0 10 0 87 114 3576524 3576551 Halomontanus rarus strain KZCA124 chromosome 1, complete sequence blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Halomontanus Halomontanus rarus
10620679 10620679 PRJNA407886_P_NODE_10829_length_927_cov_5.329040_g9493_i0 PRJNA407886 10829 927 5.32904 49.4002008 Halalkaliarchaeum desulfuricum 2055893 Archaea Archaea 63.9 4.33e-5   NTclustered gi|1338053427|gb|CP025066.1| 2055893 g9493 i0 78.448 0.461704422869471 116 12 12 7 633 742 336905 336797 Halalkaliarchaeum desulfuricum strain AArc-Sl chromosome, complete genome blastn 428 63.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halalkaliarchaeum Halalkaliarchaeum desulfuricum
20819718 20819718 PRJNA407886_P_NODE_73697_length_248_cov_0.880000_g72003_i0 PRJNA407886 73697 248 0.88 2.1824 Halorubrum salinarum 2739057 Archaea Archaea 52.8 0.022   NTclustered gi|1848526000|gb|CP053941.1| 2739057 g72003 i0 100 0.112903225806452 28 0 11 0 217 244 2671162 2671189 Halorubrum salinarum strain RHB-C chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halorubrum Halorubrum salinarum
24643851 24643851 PRJNA407886_P_NODE_46240_length_318_cov_2.604082_g44546_i0 PRJNA407886 46240 318 2.604082 8.28098076 Methanosarcinales archaeon 2250255 Archaea Archaea 209 6.79e-64   NR RYE83110.1 2250255 g44546 i0 95.2 0.990566037735849 105 5 99.1 0 316 2 310 414 RYE83110.1 MAG: translation elongation factor EF-1 subunit alpha, partial [Methanosarcinales archaeon] diamond 315 209 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
28023134 28023134 PRJNA407886_P_NODE_29265_length_425_cov_1.744318_g27572_i0 PRJNA407886 29265 425 1.744318 7.4133515 Candidatus Poseidoniia archaeon 2666348 Archaea Archaea 50.4 9.91e-5   NR MEO2179922.1 2666348 g27572 i0 32.4 0.741176470588235 105 65 69.9 4 307 11 10 114 MEO2179922.1 hypothetical protein [Candidatus Poseidoniia archaeon] diamond 315 50.4 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia       Candidatus Poseidoniia archaeon
28923652 28923652 PRJNA407886_P_NODE_80948_length_241_cov_2.375000_g79254_i0 PRJNA407886 80948 241 2.375 5.72375 Methanobacteriati 3366610 Archaea Archaea 82 6.44e-17   NR MBD18869.1 2026739 g79254 i0 50.6 1.96680497925311 79 34 95.9 2 231 1 32 107 MBD18869.1 hypothetical protein [Methanobacteriota archaeon] diamond 474 82.4 0.995145631067961 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
30738936 30738936 PRJNA407886_P_NODE_62874_length_267_cov_1.226804_g61180_i0 PRJNA407886 62874 267 1.226804 3.27556668 ANME-2 cluster archaeon 2056317 Archaea Archaea 73.2 8.98e-14   NR MCL7413678.1 2056317 g61180 i0 43.7 0.797752808988764 71 40 79.8 0 265 53 53 123 MCL7413678.1 hypothetical protein [ANME-2 cluster archaeon] diamond 213 73.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     ANME-2 cluster archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;