RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA407886", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA407886 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27138299 27138299 PRJNA407886_P_NODE_71802_length_249_cov_1.465909_g70108_i0 PRJNA407886 71802 249 1.465909 3.65011341 Chthonomonadales bacterium 2282151 Bacteria Bacteria 42.7 0.0397   NR MCW3052055.1 2282151 g70108 i0 44.9 0.590361445783133 49 22 59 1 177 31 344 387 MCW3052055.1 hypothetical protein [Chthonomonadales bacterium] diamond 147 42.7 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales     Chthonomonadales bacterium
32825182 32825182 PRJNA407886_P_NODE_79600_length_243_cov_0.894118_g77906_i0 PRJNA407886 79600 243 0.894118 2.17270674 Armatimonadetes bacterium OLB18 1617424 Bacteria Bacteria 40.4 0.0317   NR KXK19363.1 1617424 g77906 i0 35.4 0.592592592592593 48 31 59.3 0 2 145 8 55 KXK19363.1 MAG: hypothetical protein UZ18_ATM001000654, partial [Armatimonadetes bacterium OLB18] diamond 144 40.4 1 Bacteria   Bacillati Armatimonadota         Armatimonadetes bacterium OLB18

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;