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contig_metadata

24 rows where bioproject = "PRJNA407886", tax_clade = "Amoebozoa" and tax_phylum = "Discosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Discosea · 24 ✖

tax_clade 1

  • Amoebozoa · 24 ✖

bioproject 1

  • PRJNA407886 · 24 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
416996 416996 PRJNA407886_P_NODE_23501_length_502_cov_4.531469_g21810_i0 PRJNA407886 23501 502 4.531469 22.74797438 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 163 1.69e-48   NR 1PRQ_A 5755 g21810 i0 66.4 1.49402390438247 125 42 74.7 0 465 91 1 125 1PRQ_A Chain A, PROFILIN IA [Acanthamoeba castellanii] diamond 750 163 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
1692621 1692621 PRJNA407886_P_NODE_59542_length_275_cov_2.202970_g57848_i0 PRJNA407886 59542 275 2.20297 6.0581675 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 248 3e-61   NTclustered gi|470525569|ref|XM_004356569.1| 1257118 g57848 i0 83.395 1.78545454545455 271 41 98 4 7 275 760 492 Acanthamoeba castellanii str. Neff mitochondrial phosphate transporter, putative (ACA1_173800), partial mRNA blastn 491 248 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
4244015 4244015 PRJNA407886_P_NODE_19604_length_579_cov_22.689723_g17923_i0 PRJNA407886 19604 579 22.689723 131.37349617 Ripella platypodia 2047821 Discosea other_Eukaryota 913 0   NTclustered gi|1269228359|gb|MF683484.1| 2047821 g17923 i0 95.197 100.697754749568 583 18 100 7 1 579 1072 1648 Ripella platypodia clone 23.4.34 18S ribosomal RNA gene, partial sequence blastn 58304 913 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella platypodia
9345373 9345373 PRJNA407886_P_NODE_32308_length_397_cov_9.867284_g30614_i0 PRJNA407886 32308 397 9.867284 39.17311748 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 179 1.1899999999999995e-55   NR XP_004339588.1 1257118 g30614 i0 82.2 0.808564231738035 107 19 80.9 0 364 44 5 111 XP_004339588.1 60S ribosomal protein, putative [Acanthamoeba castellanii str. Neff] diamond 321 179 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
11897142 11897142 PRJNA407886_P_NODE_9570_length_1015_cov_22.805732_g8350_i0 PRJNA407886 9570 1015 22.805732 231.4781798 Ripella sp. 805 1217113 Discosea other_Eukaryota 878 0   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g8350 i0 95.332 55.1655172413793 557 18 54 6 2 554 553 1 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 55993 878 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
20819419 20819419 PRJNA407886_P_NODE_60017_length_274_cov_1.532338_g58323_i0 PRJNA407886 60017 274 1.532338 4.19860612 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 56.5 0.002   NTclustered gi|470482349|ref|XM_004342971.1| 1257118 g58323 i0 100 0.109489051094891 30 0 11 0 191 220 480 451 Acanthamoeba castellanii str. Neff cathepsin L, putative (ACA1_317670), partial mRNA blastn 30 56.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
24644208 24644208 PRJNA407886_P_NODE_63940_length_264_cov_1.602094_g62246_i0 PRJNA407886 63940 264 1.602094 4.22952816 Platyamoeba placida 3454475 Discosea other_Eukaryota 333 7.689999999999999e-87   NTclustered gi|33946348|gb|AY294153.1| 197527 g62246 i0 89.394 95.5037878787879 264 28 100 0 1 264 870 607 Platyamoeba placida actin mRNA, partial cds blastn 25213 333 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
26726954 26726954 PRJNA407886_P_NODE_79661_length_242_cov_2.976331_g77967_i0 PRJNA407886 79661 242 2.976331 7.20272102 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 67 8.96e-12   NR XP_004334493.1 1257118 g77967 i0 39.7 0.84297520661157 68 40 83.1 1 228 28 81 148 XP_004334493.1 uncharacterized protein ACA1_330540 [Acanthamoeba castellanii str. Neff] diamond 204 67 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
26980517 26980517 PRJNA407886_P_NODE_52642_length_295_cov_2.225225_g50948_i0 PRJNA407886 52642 295 2.225225 6.56441375 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 47.8 1.72e-4   NR XP_004351526.1 1257118 g50948 i0 46.9 0.498305084745763 49 26 49.8 0 263 117 26 74 XP_004351526.1 selT/selW/selH selenoprotein domain containing protein [Acanthamoeba castellanii str. Neff] diamond 147 47.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
26980541 26980541 PRJNA407886_P_NODE_78022_length_244_cov_0.900585_g76328_i0 PRJNA407886 78022 244 0.900585 2.1974274 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 79.7 3.67e-15   NR XP_004334431.1 1257118 g76328 i0 47.4 0.934426229508197 76 39 92.2 1 5 229 531 606 XP_004334431.1 WD domain, G-beta repeat-containing protein [Acanthamoeba castellanii str. Neff] diamond 228 79.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27043908 27043908 PRJNA407886_P_NODE_76022_length_246_cov_0.890173_g74328_i0 PRJNA407886 76022 246 0.890173 2.18982558 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 45.4 0.00421   NR XP_004347162.1 1257118 g74328 i0 31.3 1.01219512195122 83 44 93.9 2 232 2 125 200 XP_004347162.1 tetratricopeptide repeat domain containing protein [Acanthamoeba castellanii str. Neff] diamond 249 45.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27138278 27138278 PRJNA407886_P_NODE_43042_length_332_cov_1.046332_g41348_i0 PRJNA407886 43042 332 1.046332 3.47382224 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 125 1.01e-31   NR XP_004353773.1 1257118 g41348 i0 59.4 0.912650602409639 101 38 88.6 1 325 32 283 383 XP_004353773.1 uncharacterized protein ACA1_272680 [Acanthamoeba castellanii str. Neff] diamond 303 125 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27423391 27423391 PRJNA407886_P_NODE_35803_length_372_cov_1.006689_g34109_i0 PRJNA407886 35803 372 1.006689 3.74488308 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 142 7.1e-39   NR XP_004334753.1 1257118 g34109 i0 55 0.967741935483871 120 53 96 1 369 13 157 276 XP_004334753.1 steroid isomerase [Acanthamoeba castellanii str. Neff] diamond 360 142 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29902729 29902729 PRJNA407886_P_NODE_52011_length_297_cov_2.017857_g50317_i0 PRJNA407886 52011 297 2.017857 5.99303529 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 124 4.67e-31   NR QVH35979.1 5755 g50317 i0 60.2 1.97979797979798 98 39 99 0 2 295 350 447 QVH35979.1 adenylyl cyclase-associated protein [Acanthamoeba castellanii] diamond 588 124 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29917674 29917674 PRJNA407886_P_NODE_52231_length_297_cov_1.031250_g50537_i0 PRJNA407886 52231 297 1.03125 3.0628125 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 78.6 1.64e-14   NR XP_004333651.1 1257118 g50537 i0 58 0.818181818181818 81 32 79.8 2 296 60 365 445 XP_004333651.1 coronin3, putative [Acanthamoeba castellanii str. Neff] diamond 243 78.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30138325 30138325 PRJNA407886_P_NODE_73272_length_248_cov_0.880000_g71578_i0 PRJNA407886 73272 248 0.88 2.1824 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 57.8 2.07e-7   NR XP_004336565.1 1257118 g71578 i0 43.1 1.57258064516129 65 27 78.6 2 4 198 2954 3008 XP_004336565.1 Poly(ADP-ribose) polymerase catalytic domain containing protein [Acanthamoeba castellanii str. Neff] diamond 390 57.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30517863 30517863 PRJNA407886_P_NODE_75533_length_246_cov_0.890173_g73839_i0 PRJNA407886 75533 246 0.890173 2.18982558 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 43.9 0.0118   NR XP_004332805.1 1257118 g73839 i0 34 0.646341463414634 53 35 64.6 0 245 87 163 215 XP_004332805.1 SNAP receptor complex member 1 [Acanthamoeba castellanii str. Neff] diamond 159 43.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30549388 30549388 PRJNA407886_P_NODE_56293_length_284_cov_3.033175_g54599_i0 PRJNA407886 56293 284 3.033175 8.614217 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 58.2 1.91e-7   NR XP_004334118.1 1257118 g54599 i0 40.5 0.834507042253521 79 45 83.5 1 48 284 202 278 XP_004334118.1 CBS domain containing protein [Acanthamoeba castellanii str. Neff] diamond 237 58.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30644068 30644068 PRJNA407886_P_NODE_61013_length_271_cov_2.691919_g59319_i0 PRJNA407886 61013 271 2.691919 7.29510049 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 68.6 3.28e-12   NR XP_004334493.1 1257118 g59319 i0 45.5 1.21771217712177 55 30 60.9 0 95 259 12 66 XP_004334493.1 uncharacterized protein ACA1_330540 [Acanthamoeba castellanii str. Neff] diamond 330 68.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30707378 30707378 PRJNA407886_P_NODE_82754_length_236_cov_2.527607_g81060_i0 PRJNA407886 82754 236 2.527607 5.96515252 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 60.5 1.88e-8   NR XP_004333798.1 1257118 g81060 i0 46.9 1.81779661016949 64 33 81.4 1 236 45 244 306 XP_004333798.1 Ceramidase [Acanthamoeba castellanii str. Neff] diamond 429 60.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31212512 31212512 PRJNA407886_P_NODE_58215_length_279_cov_1.495146_g56521_i0 PRJNA407886 58215 279 1.495146 4.17145734 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 59.7 5.37e-8   NR XP_004341750.1 1257118 g56521 i0 61 0.935483870967742 41 16 44.1 0 46 168 275 315 XP_004341750.1 TolAlike protein [Acanthamoeba castellanii str. Neff] diamond 261 59.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31244543 31244543 PRJNA407886_P_NODE_72095_length_249_cov_0.875000_g70401_i0 PRJNA407886 72095 249 0.875 2.17875 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 45.8 0.0033   NR XP_004353034.1 1257118 g70401 i0 26.8 0.987951807228916 82 60 98.8 0 247 2 997 1078 XP_004353034.1 ARM family protein [Acanthamoeba castellanii str. Neff] diamond 246 45.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31750504 31750504 PRJNA407886_P_NODE_52817_length_295_cov_1.337838_g51123_i0 PRJNA407886 52817 295 1.337838 3.9466221 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 132 1.12e-34   NR XP_004352955.1 1257118 g51123 i0 67 0.986440677966102 97 32 98.6 0 292 2 100 196 XP_004352955.1 oxidoreductase, zincbinding dehydrogenase, putative [Acanthamoeba castellanii str. Neff] diamond 291 132 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32667614 32667614 PRJNA407886_P_NODE_71860_length_249_cov_1.312500_g70166_i0 PRJNA407886 71860 249 1.3125 3.268125 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 55.1 1.79e-6   NR XP_004339486.1 1257118 g70166 i0 32.9 0.951807228915663 79 47 88 2 10 228 322 400 XP_004339486.1 Nacylsphingosine amidohydrolase, putative [Acanthamoeba castellanii str. Neff] diamond 237 55.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;