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contig_metadata

19 rows where bioproject = "PRJNA407368" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 19 ✖

tax_clade 1

bioproject 1

  • PRJNA407368 · 19 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
415089 415089 PRJNA407368_S_NODE_641_length_797_cov_10.069010_g584_i0 PRJNA407368 641 797 10.06901 80.2500097 Ignisphaera sp. 2268142 Archaea Archaea 455 2.53e-154   NR MCI4437903.1 2268142 g584 i0 85.3 0.997490589711418 265 39 99.7 0 3 797 266 530 MCI4437903.1 hypothetical protein [Ignisphaera sp.] diamond 795 455 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Desulfurococcales Desulfurococcaceae Ignisphaera Ignisphaera sp.
9343299 9343299 PRJNA407368_S_NODE_6448_length_209_cov_2704.511111_g6346_i0 PRJNA407368 6448 209 2704.511111 5652.42822199 uncultured methanogenic archaeon 198240 Archaea Archaea 272 1.29e-68   NTclustered gi|378829980|gb|JN681962.1| 198240 g6346 i0 99.333 98.3923444976077 150 1 100 0 60 209 155 304 Uncultured methanogenic archaeon clone Brum-091 16S ribosomal RNA gene, partial sequence blastn 20564 272 1 Archaea   Methanobacteriati Methanobacteriota         uncultured methanogenic archaeon
10009787 10009787 PRJNA407368_S_NODE_4588_length_264_cov_1782.800000_g4486_i0 PRJNA407368 4588 264 1782.8 4706.592 root 1 Root_unresolved Root_unresolved 407 4.47e-109   NTclustered gi|2621785414|emb|OY781872.1| 1005933 g4486 i0 99.115 324.878787878788 226 2 100 0 1 226 3115394 3115619 MAG: uncultured Methanoregula sp. isolate a338d9b7-13de-4e9d-8f1a-cfe667c23436 genome assembly, chromosome: 1 blastn 85768 407 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula uncultured Methanoregula sp.
24641428 24641428 PRJNA407368_S_NODE_10540_length_151_cov_2.598361_g10438_i0 PRJNA407368 10540 151 2.598361 3.92352511 archaeon 1906665 Archaea Archaea 98.2 8.26e-23   NR RYG67480.1 1906665 g10438 i0 96 0.993377483443709 50 2 99.3 0 151 2 218 267 RYG67480.1 MAG: ADP-forming succinate--CoA ligase subunit beta [archaeon] diamond 150 98.2 1 Archaea               archaeon
26632303 26632303 PRJNA407368_S_NODE_6441_length_210_cov_2.044199_g6339_i0 PRJNA407368 6441 210 2.044199 4.2928179 archaeon 1906665 Archaea Archaea 119 9.71e-32   NR RYG65124.1 1906665 g6339 i0 85.5 0.985714285714286 69 10 98.6 0 208 2 136 204 RYG65124.1 MAG: 30S ribosomal protein S5 [archaeon] diamond 207 119 1 Archaea               archaeon
27106862 27106862 PRJNA407368_S_NODE_2082_length_427_cov_9.957286_g1981_i0 PRJNA407368 2082 427 9.957286 42.51761122 Nanobdellota archaeon 2026764 Archaea Archaea 176 1.51e-52   NR MEK6879090.1 2026764 g1981 i0 85.9 0.695550351288056 99 14 69.6 0 299 3 142 240 MEK6879090.1 tyrosine-type recombinase/integrase [Nanoarchaeota archaeon] diamond 297 176 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
27123421 27123421 PRJNA407368_S_NODE_3162_length_332_cov_5.719472_g3060_i0 PRJNA407368 3162 332 5.719472 18.98864704 root 1 Root_unresolved Root_unresolved 56.6 8.83e-7   NR MFA5142520.1 2026803 g3060 i0 49.2 1.30120481927711 63 26 56.9 2 314 126 121 177 MFA5142520.1 hypothetical protein [Candidatus Woesearchaeota archaeon] diamond 432 56.6 1 Archaea   Nanobdellati Candidatus Woesearchaeota         Candidatus Woesearchaeota archaeon
27928293 27928293 PRJNA407368_S_NODE_1745_length_473_cov_3.637387_g1648_i0 PRJNA407368 1745 473 3.637387 17.20484051 archaeon 1906665 Archaea Archaea 85.9 1.73e-16   NR RYH05012.1 1906665 g1648 i0 37.3 1.72515856236786 158 78 99.6 4 472 2 129 266 RYH05012.1 MAG: hypothetical protein EON65_45885 [archaeon] diamond 816 85.9 1 Archaea               archaeon
30012424 30012424 PRJNA407368_S_NODE_9551_length_161_cov_3.772727_g9449_i0 PRJNA407368 9551 161 3.772727 6.07409047 archaeon 1906665 Archaea Archaea 92.4 1.37e-20   NR RYG67480.1 1906665 g9449 i0 88.7 0.987577639751553 53 6 98.8 0 2 160 266 318 RYG67480.1 MAG: ADP-forming succinate--CoA ligase subunit beta [archaeon] diamond 159 92.4 1 Archaea               archaeon
30454953 30454953 PRJNA407368_S_NODE_4093_length_285_cov_4.988281_g3991_i0 PRJNA407368 4093 285 4.988281 14.21660085 Candidatus Bathyarchaeia archaeon 3045160 Archaea Archaea 54.3 4.92e-6   NR MFA7396880.1 3045160 g3991 i0 52.4 1.25263157894737 42 20 44.2 0 185 60 85 126 MFA7396880.1 kelch repeat-containing protein [Candidatus Bathyarchaeia archaeon] diamond 357 54.3 1 Archaea   Thermoproteati Candidatus Bathyarchaeota Candidatus Bathyarchaeia       Candidatus Bathyarchaeia archaeon
30502945 30502945 PRJNA407368_S_NODE_4113_length_284_cov_5.011765_g4011_i0 PRJNA407368 4113 284 5.011765 14.2334126 root 1 Root_unresolved Root_unresolved 45.8 0.00289   NR HET8685322.1 2213 g4011 i0 49.2 1.34154929577465 61 28 64.4 1 283 101 111 168 HET8685322.1 hypothetical protein [Methanosarcina sp.] diamond 381 45.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.
30738889 30738889 PRJNA407368_S_NODE_8134_length_179_cov_4.180000_g8032_i0 PRJNA407368 8134 179 4.18 7.4822 uncultured archaeon 115547 Archaea Archaea 69.3 6.62e-12   NR QBM02837.1 115547 g8032 i0 54.2 0.988826815642458 59 26 98.9 1 178 2 538 595 QBM02837.1 hypothetical protein [uncultured archaeon] diamond 177 69.3 1 Archaea               uncultured archaeon
31071737 31071737 PRJNA407368_S_NODE_4555_length_266_cov_3.565401_g4453_i0 PRJNA407368 4555 266 3.565401 9.48396666 root 1 Root_unresolved Root_unresolved 67.4 8.57e-12   NR MAH43454.1 1906665 g4453 i0 44.7 2.53759398496241 76 39 82.3 2 220 2 9 84 MAH43454.1 hypothetical protein [archaeon] diamond 675 67.4 1 Archaea               archaeon
31197572 31197572 PRJNA407368_S_NODE_2295_length_405_cov_4.792553_g2194_i0 PRJNA407368 2295 405 4.792553 19.40983965 Nanobdellati 1783276 Archaea Archaea 79.3 1.23e-16   NR MBS3131226.1 2026803 g2194 i0 51.5 2.04444444444444 68 33 50.4 0 258 55 1 68 MBS3131226.1 MoaD/ThiS family protein [Candidatus Woesearchaeota archaeon] diamond 828 79.3 1 Archaea   Nanobdellati Candidatus Woesearchaeota         Candidatus Woesearchaeota archaeon
31276076 31276076 PRJNA407368_S_NODE_3655_length_306_cov_5.270758_g3553_i0 PRJNA407368 3655 306 5.270758 16.12851948 archaeon 1906665 Archaea Archaea 46.6 0.00346   NR RYH29984.1 1906665 g3553 i0 67.9 0.843137254901961 28 9 27.5 0 249 166 532 559 RYH29984.1 MAG: hypothetical protein EON65_06600 [archaeon] diamond 258 46.6 1 Archaea               archaeon
31813841 31813841 PRJNA407368_S_NODE_4097_length_285_cov_4.226562_g3995_i0 PRJNA407368 4097 285 4.226562 12.0457017 Candidatus Nanoarchaeia archaeon 2910166 Archaea Archaea 185 4.9799999999999995e-57   NR MDD5133523.1 2910166 g3995 i0 95.8 1 95 4 100 0 1 285 43 137 MDD5133523.1 archaeal proteasome endopeptidase complex subunit alpha [Candidatus Nanoarchaeia archaeon] diamond 285 185 1 Archaea   Nanobdellati Nanobdellota Candidatus Nanoarchaeia       Candidatus Nanoarchaeia archaeon
32320443 32320443 PRJNA407368_S_NODE_10659_length_150_cov_2.256198_g10557_i0 PRJNA407368 10659 150 2.256198 3.384297 archaeon 1906665 Archaea Archaea 60.8 4.15e-9   NR RYH30111.1 1906665 g10557 i0 68.1 0.94 47 13 90 1 137 3 2608 2654 RYH30111.1 MAG: DUF4704 domain-containing protein [archaeon] diamond 141 60.8 1 Archaea               archaeon
32684142 32684142 PRJNA407368_S_NODE_10580_length_151_cov_1.721311_g10478_i0 PRJNA407368 10580 151 1.721311 2.59917961 root 1 Root_unresolved Root_unresolved 44.3 0.00222   NR MEK6879608.1 2026764 g10478 i0 46.7 1.82781456953642 45 24 89.4 0 145 11 59 103 MEK6879608.1 replication protein [Nanoarchaeota archaeon] diamond 276 44.7 0.991051454138702 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
32856498 32856498 PRJNA407368_S_NODE_8380_length_176_cov_1.714286_g8278_i0 PRJNA407368 8380 176 1.714286 3.01714336 archaeon 1906665 Archaea Archaea 95.9 8.57e-22   NR RYG67480.1 1906665 g8278 i0 80.7 0.971590909090909 57 11 97.2 0 3 173 56 112 RYG67480.1 MAG: ADP-forming succinate--CoA ligase subunit beta [archaeon] diamond 171 95.9 1 Archaea               archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;