RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA407368" and tax_phylum = "Cossaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Cossaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA407368 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6792811 6792811 PRJNA407368_S_NODE_4786_length_257_cov_3.061404_g4684_i0 PRJNA407368 4786 257 3.061404 7.86780828 Psittacidae aveparvovirus 2794556 Viruses Viruses 263 9.92e-66   NTclustered gi|2015372674|gb|MW046380.1| 2794556 g4684 i0 94.675 0.929961089494163 169 9 92 0 21 189 681 513 MAG: Psittacidae aveparvovirus isolate fmg67par043 genomic sequence, sequence blastn 239 263 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Aveparvovirus Psittacidae aveparvovirus
22091637 22091637 PRJNA407368_S_NODE_7698_length_186_cov_2.382166_g7596_i0 PRJNA407368 7698 186 2.382166 4.43082876 Psittacidae aveparvovirus 2794556 Viruses Viruses 289 1.11e-73   NTclustered gi|2015372674|gb|MW046380.1| 2794556 g7596 i0 94.624 1 186 10 100 0 1 186 469 284 MAG: Psittacidae aveparvovirus isolate fmg67par043 genomic sequence, sequence blastn 186 289 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Aveparvovirus Psittacidae aveparvovirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;