RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

5 rows where bioproject = "PRJNA407368" and tax_kingdom = "Nanobdellati"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_kingdom 1

  • Nanobdellati · 5 ✖

bioproject 1

  • PRJNA407368 · 5 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27106862 27106862 PRJNA407368_S_NODE_2082_length_427_cov_9.957286_g1981_i0 PRJNA407368 2082 427 9.957286 42.51761122 Nanobdellota archaeon 2026764 Archaea Archaea 176 1.51e-52   NR MEK6879090.1 2026764 g1981 i0 85.9 0.695550351288056 99 14 69.6 0 299 3 142 240 MEK6879090.1 tyrosine-type recombinase/integrase [Nanoarchaeota archaeon] diamond 297 176 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
27123421 27123421 PRJNA407368_S_NODE_3162_length_332_cov_5.719472_g3060_i0 PRJNA407368 3162 332 5.719472 18.98864704 root 1 Root_unresolved Root_unresolved 56.6 8.83e-7   NR MFA5142520.1 2026803 g3060 i0 49.2 1.30120481927711 63 26 56.9 2 314 126 121 177 MFA5142520.1 hypothetical protein [Candidatus Woesearchaeota archaeon] diamond 432 56.6 1 Archaea   Nanobdellati Candidatus Woesearchaeota         Candidatus Woesearchaeota archaeon
31197572 31197572 PRJNA407368_S_NODE_2295_length_405_cov_4.792553_g2194_i0 PRJNA407368 2295 405 4.792553 19.40983965 Nanobdellati 1783276 Archaea Archaea 79.3 1.23e-16   NR MBS3131226.1 2026803 g2194 i0 51.5 2.04444444444444 68 33 50.4 0 258 55 1 68 MBS3131226.1 MoaD/ThiS family protein [Candidatus Woesearchaeota archaeon] diamond 828 79.3 1 Archaea   Nanobdellati Candidatus Woesearchaeota         Candidatus Woesearchaeota archaeon
31813841 31813841 PRJNA407368_S_NODE_4097_length_285_cov_4.226562_g3995_i0 PRJNA407368 4097 285 4.226562 12.0457017 Candidatus Nanoarchaeia archaeon 2910166 Archaea Archaea 185 4.9799999999999995e-57   NR MDD5133523.1 2910166 g3995 i0 95.8 1 95 4 100 0 1 285 43 137 MDD5133523.1 archaeal proteasome endopeptidase complex subunit alpha [Candidatus Nanoarchaeia archaeon] diamond 285 185 1 Archaea   Nanobdellati Nanobdellota Candidatus Nanoarchaeia       Candidatus Nanoarchaeia archaeon
32684142 32684142 PRJNA407368_S_NODE_10580_length_151_cov_1.721311_g10478_i0 PRJNA407368 10580 151 1.721311 2.59917961 root 1 Root_unresolved Root_unresolved 44.3 0.00222   NR MEK6879608.1 2026764 g10478 i0 46.7 1.82781456953642 45 24 89.4 0 145 11 59 103 MEK6879608.1 replication protein [Nanoarchaeota archaeon] diamond 276 44.7 0.991051454138702 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;