RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA407368", tax_kingdom = "Metazoa" and tax_phylum = "Mollusca"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 4 ✖

tax_kingdom 1

  • Metazoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA407368 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5518991 5518991 PRJNA407368_S_NODE_9905_length_157_cov_2.765625_g9803_i0 PRJNA407368 9905 157 2.765625 4.34203125 Ruditapes philippinarum 129788 Mollusca Mollusca 130 5.820000000000001e-26   NTclustered gi|2616461450|ref|XM_060740569.1| 129788 g9803 i0 81.818 21.9363057324841 154 28 98 0 4 157 211 364 PREDICTED: Ruditapes philippinarum tubulin beta-4B chain (LOC132750554), transcript variant X3, mRNA blastn 3444 130 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Ruditapes Ruditapes philippinarum
8068371 8068371 PRJNA407368_S_NODE_3207_length_329_cov_6.153333_g3105_i0 PRJNA407368 3207 329 6.153333 20.24446557 Physella acuta 109671 Mollusca Mollusca 407 5.74e-109   NTclustered gi|2572452079|ref|XR_009385380.1| 109671 g3105 i0 91.554 71.3434650455927 296 24 90 1 1 295 324 29 PREDICTED: Physella acuta large subunit ribosomal RNA (LOC131933988), rRNA blastn 23472 407 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Physidae Physella Physella acuta
23367136 23367136 PRJNA407368_S_NODE_2459_length_388_cov_287.927577_g2357_i0 PRJNA407368 2459 388 287.927577 1117.15899876 Gigantopelta aegis 1735272 Mollusca Mollusca 134 1.29e-26   NTclustered gi|2034271035|ref|XR_005960499.1| 1735272 g2357 i0 81.006 8.32731958762887 179 24 45 8 205 378 3686 3513 PREDICTED: Gigantopelta aegis large subunit ribosomal RNA (LOC121392465), rRNA blastn 3231 134 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Neomphalida Peltospiridae Gigantopelta Gigantopelta aegis
28149422 28149422 PRJNA407368_S_NODE_6265_length_214_cov_2.664865_g6163_i0 PRJNA407368 6265 214 2.664865 5.7028111 Potamilus streckersoni 2493646 Mollusca Mollusca 72 1.2e-12   NR KAK3604987.1 2493646 g6163 i0 51.5 4.5981308411215 68 32 95.3 1 9 212 102 168 KAK3604987.1 hypothetical protein CHS0354_000652 [Potamilus streckersoni] diamond 984 72 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Unionida Unionidae Potamilus Potamilus streckersoni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;