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contig_metadata

17 rows where bioproject = "PRJNA407368", tax_clade = "Sar" and tax_phylum = "Oomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Oomycota · 17 ✖

tax_clade 1

  • Sar · 17 ✖

bioproject 1

  • PRJNA407368 · 17 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
414948 414948 PRJNA407368_S_NODE_1081_length_606_cov_4.305026_g1004_i0 PRJNA407368 1081 606 4.305026 26.08845756 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 459 3.03e-124   NTclustered gi|166047342|emb|CU360000.1| 100861 g1004 i0 88.8 23.7227722772277 375 40 96 2 1 373 432 58 Aphanomyces euteiches cDNA blastn 14376 459 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
1690007 1690007 PRJNA407368_S_NODE_8002_length_181_cov_3.072368_g7900_i0 PRJNA407368 8002 181 3.072368 5.56098608 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 97.1 7e-16   NTclustered gi|166039189|emb|CU355239.1| 100861 g7900 i0 90.411 8.67403314917127 73 7 40 0 70 142 744 672 Aphanomyces euteiches cDNA blastn 1570 97.1 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
7459688 7459688 PRJNA407368_S_NODE_9746_length_159_cov_2.700000_g9644_i0 PRJNA407368 9746 159 2.7 4.293 Saprolegniales 4763 SAR_Eukaryotes SAR_Eukaryotes 237 3.39e-58   NTclustered gi|1111669722|ref|NC_032051.1| 112090 g9644 i0 94.231 103.578616352201 156 8 97 1 1 155 2364 2209 Aphanomyces astaci isolate AP03 mitochondrion, complete genome blastn 16469 237 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
8068430 8068430 PRJNA407368_S_NODE_6007_length_219_cov_187.831579_g5905_i0 PRJNA407368 6007 219 187.831579 411.35115801 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 366 6.09e-97   NTclustered gi|698793876|ref|XR_717098.1| 112090 g5905 i0 96.804 80.3196347031963 219 7 100 0 1 219 2055 2273 Aphanomyces astaci 28S ribosomal RNA rRNA blastn 17590 366 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
8734553 8734553 PRJNA407368_S_NODE_6987_length_198_cov_22.899408_g6885_i0 PRJNA407368 6987 198 22.899408 45.34082784 Aphanomyces 100860 SAR_Eukaryotes SAR_Eukaryotes 344 2.53e-90   NTclustered gi|166048041|emb|CU364162.1| 100861 g6885 i0 100 93 186 0 94 0 1 186 273 458 Aphanomyces euteiches cDNA blastn 18414 344 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
9343307 9343307 PRJNA407368_S_NODE_6808_length_202_cov_4.248555_g6706_i0 PRJNA407368 6808 202 4.248555 8.5820811 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 313 7.31e-81   NTclustered gi|166038792|emb|CU355022.1| 100861 g6706 i0 94.554 24.3069306930693 202 11 100 0 1 202 210 411 Aphanomyces euteiches cDNA blastn 4910 313 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
11894012 11894012 PRJNA407368_S_NODE_8810_length_170_cov_16.695035_g8708_i0 PRJNA407368 8810 170 16.695035 28.3815595 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 272 9.999999999999999e-69   NTclustered gi|698793876|ref|XR_717098.1| 112090 g8708 i0 95.833 81.5647058823529 168 7 99 0 1 168 1918 2085 Aphanomyces astaci 28S ribosomal RNA rRNA blastn 13866 272 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
13168802 13168802 PRJNA407368_S_NODE_2291_length_405_cov_75.486702_g2190_i0 PRJNA407368 2291 405 75.486702 305.7211431 Aphanomyces brasiliensis 2525538 SAR_Eukaryotes SAR_Eukaryotes 370 9.44e-98   NTclustered gi|2098511708|gb|OK235679.1| 2525538 g2190 i0 95.652 57.7283950617284 230 10 57 0 19 248 329 100 Aphanomyces brasiliensis voucher CCIBt4545 small subunit ribosomal RNA gene, partial sequence blastn 23380 370 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces brasiliensis
13168841 13168841 PRJNA407368_S_NODE_4071_length_286_cov_123.443580_g3969_i0 PRJNA407368 4071 286 123.44358 353.0486388 Aphanomyces brasiliensis 2525538 SAR_Eukaryotes SAR_Eukaryotes 444 3.73e-120   NTclustered gi|2098511708|gb|OK235679.1| 2525538 g3969 i0 96.992 93.2552447552448 266 5 100 1 24 286 561 826 Aphanomyces brasiliensis voucher CCIBt4545 small subunit ribosomal RNA gene, partial sequence blastn 26671 444 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces brasiliensis
14443997 14443997 PRJNA407368_S_NODE_3352_length_322_cov_3.208191_g3250_i0 PRJNA407368 3352 322 3.208191 10.33037502 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 542 1.47e-149   NTclustered gi|1111669722|ref|NC_032051.1| 112090 g3250 i0 96.914 104.350931677019 324 8 100 2 1 322 2682 2359 Aphanomyces astaci isolate AP03 mitochondrion, complete genome blastn 33601 542 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
14444026 14444026 PRJNA407368_S_NODE_5072_length_246_cov_13.405530_g4970_i0 PRJNA407368 5072 246 13.40553 32.9776038 Saprolegnia parasitica 101203 SAR_Eukaryotes SAR_Eukaryotes 287 5.599999999999999e-73   NTclustered gi|813199067|ref|XR_001099866.1| 695850 g4970 i0 90.135 68.9552845528455 223 18 90 4 19 239 1448 1668 Saprolegnia parasitica CBS 223.65 28S ribosomal RNA rRNA blastn 16963 287 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
18266662 18266662 PRJNA407368_S_NODE_3175_length_331_cov_105.761589_g3073_i0 PRJNA407368 3175 331 105.761589 350.07085959 Aphanomyces brasiliensis 2525538 SAR_Eukaryotes SAR_Eukaryotes 370 7.58e-98   NTclustered gi|2098511708|gb|OK235679.1| 2525538 g3073 i0 95.652 70.6344410876133 230 10 69 0 84 313 100 329 Aphanomyces brasiliensis voucher CCIBt4545 small subunit ribosomal RNA gene, partial sequence blastn 23380 370 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces brasiliensis
19540825 19540825 PRJNA407368_S_NODE_3176_length_331_cov_105.112583_g3074_i0 PRJNA407368 3176 331 105.112583 347.92264973 Aphanomyces brasiliensis 2525538 SAR_Eukaryotes SAR_Eukaryotes 370 7.58e-98   NTclustered gi|2098511708|gb|OK235679.1| 2525538 g3074 i0 95.652 70.6344410876133 230 10 69 0 84 313 100 329 Aphanomyces brasiliensis voucher CCIBt4545 small subunit ribosomal RNA gene, partial sequence blastn 23380 370 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces brasiliensis
19540847 19540847 PRJNA407368_S_NODE_4056_length_287_cov_57.399225_g3954_i0 PRJNA407368 4056 287 57.399225 164.73577575 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 263 1.13e-65   NTclustered gi|166038860|emb|CU355090.1| 100861 g3954 i0 88.393 1855.27177700348 224 19 78 4 1 224 425 209 Aphanomyces euteiches cDNA blastn 532463 263 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
22758663 22758663 PRJNA407368_S_NODE_6638_length_205_cov_11.522727_g6536_i0 PRJNA407368 6638 205 11.522727 23.62159035 Aphanomyces 100860 SAR_Eukaryotes SAR_Eukaryotes 363 7.279999999999998e-96   NTclustered gi|166051677|emb|CU353805.1| 100861 g6536 i0 98.537 98.0439024390244 205 3 100 0 1 205 85 289 Aphanomyces euteiches cDNA blastn 20099 363 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
23367221 23367221 PRJNA407368_S_NODE_7279_length_193_cov_19.597561_g7177_i0 PRJNA407368 7279 193 19.597561 37.82329273 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 351 1.46e-92   NTclustered gi|698793876|ref|XR_717098.1| 112090 g7177 i0 99.485 100.243523316062 194 0 100 1 1 193 1854 1661 Aphanomyces astaci 28S ribosomal RNA rRNA blastn 19347 351 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
31212456 31212456 PRJNA407368_S_NODE_2035_length_434_cov_3.797531_g1935_i0 PRJNA407368 2035 434 3.797531 16.48128454 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 47.4 5.9e-4   NR GLD98057.1 114742 g1935 i0 42.3 1.6036866359447 52 30 35.9 0 246 91 1 52 GLD98057.1 hypothetical protein PINS_up006754 [Pythium insidiosum] diamond 696 47.4 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;