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contig_metadata

34 rows where bioproject = "PRJNA407368", tax_clade = "Sar" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 34 ✖

tax_clade 1

  • Sar · 34 ✖

bioproject 1

  • PRJNA407368 · 34 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
414958 414958 PRJNA407368_S_NODE_1421_length_533_cov_4.486111_g1328_i0 PRJNA407368 1421 533 4.486111 23.91097163 Rosculus sp. 2231160 SAR_Eukaryotes SAR_Eukaryotes 863 0   NTclustered gi|1402550476|gb|MH488762.1| 2231160 g1328 i0 96.899 10.8761726078799 516 14 97 2 1 515 540 26 Rosculus sp. isolate CCAC3 small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 5797 863 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus sp.
415091 415091 PRJNA407368_S_NODE_6581_length_207_cov_2.275281_g6479_i0 PRJNA407368 6581 207 2.275281 4.70983167 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 270 4.59e-68   NTclustered gi|756877536|ref|NC_026310.1| 372086 g6479 i0 90.047 1.36714975845411 211 17 100 2 1 207 18626 18416 Paracercomonas marina strain ATCC 50344 mitochondrion, complete genome blastn 283 270 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
415107 415107 PRJNA407368_S_NODE_7501_length_189_cov_2.943750_g7399_i0 PRJNA407368 7501 189 2.94375 5.5636875 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 82.4 2.07e-11   NTclustered gi|756877536|ref|NC_026310.1| 372086 g7399 i0 96 0.264550264550265 50 2 26 0 1 50 18608 18657 Paracercomonas marina strain ATCC 50344 mitochondrion, complete genome blastn 50 82.4 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
415153 415153 PRJNA407368_S_NODE_9961_length_156_cov_48.874016_g9859_i0 PRJNA407368 9961 156 48.874016 76.24346496 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 231 1.5399999999999998e-56   NTclustered gi|238617605|gb|FJ973380.1| 45107 g9859 i0 93.548 99.8717948717949 155 10 99 0 1 155 1032 1186 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 15580 231 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
1690036 1690036 PRJNA407368_S_NODE_962_length_650_cov_5.879227_g888_i0 PRJNA407368 962 650 5.879227 38.2149755 Rosculus sp. 2231160 SAR_Eukaryotes SAR_Eukaryotes 767 0   NTclustered gi|1402550476|gb|MH488762.1| 2231160 g888 i0 89.644 27.5861538461538 618 43 94 10 18 631 1136 536 Rosculus sp. isolate CCAC3 small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 17931 767 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus sp.
5518804 5518804 PRJNA407368_S_NODE_2245_length_410_cov_4.656168_g2144_i0 PRJNA407368 2245 410 4.656168 19.0902888 Rosculus vulgaris 2231165 SAR_Eukaryotes SAR_Eukaryotes 285 3.57e-72   NTclustered gi|1402550474|gb|MH488760.1| 2231165 g2144 i0 82.789 20.2658536585366 337 41 81 15 1 333 2556 2879 Rosculus vulgaris isolate CCA sequence blastn 8309 285 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus vulgaris
5518831 5518831 PRJNA407368_S_NODE_3125_length_334_cov_9.763934_g3023_i0 PRJNA407368 3125 334 9.763934 32.61153956 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 246 1.35e-60   NTclustered gi|238617602|gb|FJ973377.1| 188950 g3023 i0 90.374 56.1736526946108 187 18 56 0 148 334 1500 1314 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 18762 246 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
5518878 5518878 PRJNA407368_S_NODE_4745_length_258_cov_7.816594_g4643_i0 PRJNA407368 4745 258 7.816594 20.16681252 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 407 4.35e-109   NTclustered gi|88792583|gb|DQ386164.1| 372086 g4643 i0 96.721 31.8759689922481 244 8 95 0 15 258 2215 1972 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 8224 407 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
5518897 5518897 PRJNA407368_S_NODE_565_length_852_cov_6.335358_g514_i0 PRJNA407368 565 852 6.335358 53.97725016 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 767 0   NTclustered gi|756877536|ref|NC_026310.1| 372086 g514 i0 85.734 0.872065727699531 743 87 85 15 126 852 817 78 Paracercomonas marina strain ATCC 50344 mitochondrion, complete genome blastn 743 767 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
6792772 6792772 PRJNA407368_S_NODE_2726_length_364_cov_29.800000_g2624_i0 PRJNA407368 2726 364 29.8 108.472 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 361 5.049999999999999e-95   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g2624 i0 85.915 54.456043956044 355 30 96 11 1 351 3661 3999 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 19822 361 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
8068343 8068343 PRJNA407368_S_NODE_2047_length_432_cov_87.325062_g1946_i0 PRJNA407368 2047 432 87.325062 377.24426784 Heteromitidae sp. Bodomorpha DB 281028 SAR_Eukaryotes SAR_Eukaryotes 640 6.999999999999999e-179   NTclustered gi|48727881|gb|AY620256.1| 281028 g1946 i0 96.859 82.7060185185185 382 11 88 1 16 397 891 511 Heteromitidae sp. Bodomorpha DB small subunit ribosomal RNA gene, partial sequence blastn 35729 640 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae   Heteromitidae sp. Bodomorpha DB
8068442 8068442 PRJNA407368_S_NODE_6507_length_208_cov_7.547486_g6405_i0 PRJNA407368 6507 208 7.547486 15.69877088 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 239 1.2999999999999999e-58   NTclustered gi|238617605|gb|FJ973380.1| 45107 g6405 i0 88.5 18.7740384615385 200 19 95 4 12 208 2377 2179 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 3905 239 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
9343346 9343346 PRJNA407368_S_NODE_8748_length_171_cov_5.626761_g8646_i0 PRJNA407368 8748 171 5.626761 9.62176131 Cercozoa sp. CC-2009d 629762 SAR_Eukaryotes SAR_Eukaryotes 156 1.06e-33   NTclustered gi|290760487|gb|GQ144690.1| 629762 g8646 i0 83.626 100.40350877193 171 22 100 2 1 171 3008 2844 Cercozoa sp. CC-2009d large subunit ribosomal RNA gene, partial sequence blastn 17169 156 1 Eukaryota Sar   Cercozoa         Cercozoa sp. CC-2009d
9343361 9343361 PRJNA407368_S_NODE_9528_length_161_cov_51.083333_g9426_i0 PRJNA407368 9528 161 51.083333 82.24416613 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 263 5.68e-66   NTclustered gi|238617605|gb|FJ973380.1| 45107 g9426 i0 96.835 95.8260869565217 158 4 98 1 1 157 1032 1189 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 15428 263 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
11893994 11893994 PRJNA407368_S_NODE_7790_length_184_cov_5.670968_g7688_i0 PRJNA407368 7790 184 5.670968 10.43458112 Protaspis grandis 361427 SAR_Eukaryotes SAR_Eukaryotes 145 2.5199999999999997e-30   NTclustered gi|290760486|gb|GQ144689.1| 361427 g7688 i0 81.522 47.1521739130435 184 26 97 7 1 178 2273 2092 Protaspis grandis large subunit ribosomal RNA gene, partial sequence blastn 8676 145 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida Thaumatomastigidae Protaspis Protaspis grandis
14443980 14443980 PRJNA407368_S_NODE_2652_length_370_cov_36.126100_g2550_i0 PRJNA407368 2652 370 36.1261 133.66657 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 309 1.89e-79   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g2550 i0 98.295 52.6837837837838 176 3 48 0 1 176 3661 3836 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 19493 309 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
14444108 14444108 PRJNA407368_S_NODE_8972_length_168_cov_85.172662_g8870_i0 PRJNA407368 8972 168 85.172662 143.09007216 Sandona mutans 563755 SAR_Eukaryotes SAR_Eukaryotes 279 5.95e-71   NTclustered gi|2163362299|dbj|LC663795.1| 563755 g8870 i0 100 91.375 151 0 90 0 18 168 1254 1404 Sandona mutans Flagella An1019C gene for 18S rRNA, partial sequence blastn 15351 279 1 Eukaryota Sar   Cercozoa   Glissomonadida Sandonidae Sandona Sandona mutans
15109422 15109422 PRJNA407368_S_NODE_2052_length_431_cov_140.902985_g1951_i0 PRJNA407368 2052 431 140.902985 607.29186535 Lecythium 238772 SAR_Eukaryotes SAR_Eukaryotes 473 7.49e-129   NTclustered gi|49356806|gb|AY605210.1| 175275 g1951 i0 91.714 79.9002320185615 350 16 79 9 7 347 636 291 Uncultured cercozoan clone Sey075 small subunit ribosomal RNA gene, partial sequence blastn 34437 473 1 Eukaryota Sar   Cercozoa         uncultured Cercozoa
15717740 15717740 PRJNA407368_S_NODE_2673_length_368_cov_17.412979_g2571_i0 PRJNA407368 2673 368 17.412979 64.07976272 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 364 3.95e-96   NTclustered gi|88792583|gb|DQ386164.1| 372086 g2571 i0 92.52 75.8777173913043 254 19 69 0 88 341 1534 1787 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 27923 364 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
15717766 15717766 PRJNA407368_S_NODE_3613_length_308_cov_23.623656_g3511_i0 PRJNA407368 3613 308 23.623656 72.76086048 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 344 4.239999999999999e-90   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g3511 i0 92.593 64.737012987013 243 13 78 5 1 240 3661 3901 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 19939 344 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
16992615 16992615 PRJNA407368_S_NODE_4234_length_279_cov_6.504000_g4132_i0 PRJNA407368 4234 279 6.504 18.14616 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 516 7.58e-142   NTclustered gi|238617602|gb|FJ973377.1| 188950 g4132 i0 100 1 279 0 100 0 1 279 788 510 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 279 516 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
18266689 18266689 PRJNA407368_S_NODE_4295_length_276_cov_62.829960_g4193_i0 PRJNA407368 4295 276 62.82996 173.4106896 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 444 3.58e-120   NTclustered gi|88792583|gb|DQ386164.1| 372086 g4193 i0 95.652 102.192028985507 276 12 100 0 1 276 1759 2034 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 28205 444 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
19540802 19540802 PRJNA407368_S_NODE_2116_length_423_cov_16.027919_g2015_i0 PRJNA407368 2116 423 16.027919 67.79809737 Cercomonas sp. HFCC549 458874 SAR_Eukaryotes SAR_Eukaryotes 736 0   NTclustered gi|161015714|gb|EF681948.1| 458874 g2015 i0 98.104 44.2860520094563 422 8 99 0 1 422 614 193 Cercomonas sp. HFCC549 28S ribosomal RNA gene, partial sequence blastn 18733 736 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp. HFCC549
19540871 19540871 PRJNA407368_S_NODE_5096_length_245_cov_24.314815_g4994_i0 PRJNA407368 5096 245 24.314815 59.57129675 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 353 5.41e-93   NTclustered gi|238617605|gb|FJ973380.1| 45107 g4994 i0 93.305 98.8816326530612 239 16 98 0 7 245 1646 1408 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 24226 353 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
19540933 19540933 PRJNA407368_S_NODE_7916_length_182_cov_18.039216_g7814_i0 PRJNA407368 7916 182 18.039216 32.83137312 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 265 1.83e-66   NTclustered gi|238617602|gb|FJ973377.1| 188950 g7814 i0 92.857 100.06043956044 182 13 100 0 1 182 1495 1314 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 18211 265 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
20207917 20207917 PRJNA407368_S_NODE_5336_length_237_cov_25.211538_g5234_i0 PRJNA407368 5336 237 25.211538 59.75134506 Chlamydophryidae 862251 SAR_Eukaryotes SAR_Eukaryotes 374 4e-99   NTclustered gi|1198038656|gb|KX580623.1| 2004639 g5234 i0 95.359 99.8101265822785 237 8 99 2 4 237 320 84 Lecythium hyalinum strain KD1012 18S ribosomal RNA gene, partial sequence blastn 23655 374 1 Eukaryota Sar   Cercozoa Thecofilosea Tectofilosida Chlamydophryidae Lecythium Lecythium hyalinum
20816734 20816734 PRJNA407368_S_NODE_4277_length_277_cov_27.197581_g4175_i0 PRJNA407368 4277 277 27.197581 75.33729937 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 366 8.01e-97   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g4175 i0 92.105 71.3212996389892 266 11 96 4 12 277 3916 3661 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 19756 366 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
20816846 20816846 PRJNA407368_S_NODE_9537_length_161_cov_7.272727_g9435_i0 PRJNA407368 9537 161 7.272727 11.70909047 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 281 1.57e-71   NTclustered gi|88792583|gb|DQ386164.1| 372086 g9435 i0 98.137 247.031055900621 161 3 100 0 1 161 2489 2649 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 39772 281 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
22091530 22091530 PRJNA407368_S_NODE_3338_length_322_cov_7.771331_g3236_i0 PRJNA407368 3338 322 7.771331 25.02368582 Rosculus sp. 2231160 SAR_Eukaryotes SAR_Eukaryotes 477 4.2099999999999985e-130   NTclustered gi|1402550476|gb|MH488762.1| 2231160 g3236 i0 93.73 44.7453416149068 319 18 99 2 5 322 1609 1926 Rosculus sp. isolate CCAC3 small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 14408 477 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus sp.
22091603 22091603 PRJNA407368_S_NODE_6058_length_218_cov_8.613757_g5956_i0 PRJNA407368 6058 218 8.613757 18.77799026 Protaspis grandis 361427 SAR_Eukaryotes SAR_Eukaryotes 75 4.11e-9   NTclustered gi|290760486|gb|GQ144689.1| 361427 g5956 i0 74.737 2.24311926605505 190 37 85 8 20 204 2109 2292 Protaspis grandis large subunit ribosomal RNA gene, partial sequence blastn 489 75 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida Thaumatomastigidae Protaspis Protaspis grandis
22091627 22091627 PRJNA407368_S_NODE_7218_length_194_cov_30.818182_g7116_i0 PRJNA407368 7218 194 30.818182 59.78727308 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 268 1.5299999999999998e-67   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g7116 i0 92.935 96.6958762886598 184 13 95 0 11 194 2543 2360 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 18759 268 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
22091683 22091683 PRJNA407368_S_NODE_9998_length_156_cov_2.826772_g9896_i0 PRJNA407368 9998 156 2.826772 4.40976432 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 198 1.56e-46   NTclustered gi|756877536|ref|NC_026310.1| 372086 g9896 i0 92.199 0.903846153846154 141 10 90 1 11 151 1048 909 Paracercomonas marina strain ATCC 50344 mitochondrion, complete genome blastn 141 198 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
24033386 24033386 PRJNA407368_S_NODE_10159_length_154_cov_37.936000_g10057_i0 PRJNA407368 10159 154 37.936 58.42144 Imbricatea 1736114 SAR_Eukaryotes SAR_Eukaryotes 230 5.439999999999998e-56   NTclustered gi|2493707699|dbj|LC764482.1| 45107 g10057 i0 99.213 82.4675324675325 127 1 82 0 1 127 985 1111 Heteromita globosa LAP3-2017 gene for 18S rRNA, partial sequence blastn 12700 230 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
24641523 24641523 PRJNA407368_S_NODE_4840_length_254_cov_22.786667_g4738_i0 PRJNA407368 4840 254 22.786667 57.878134180000004 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 270 5.8499999999999984e-68   NTclustered gi|88792583|gb|DQ386164.1| 372086 g4738 i0 95.808 66.0511811023622 167 7 66 0 1 167 1700 1534 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 16777 270 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;