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contig_metadata

4 rows where bioproject = "PRJNA407368", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 4 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 4 ✖

bioproject 1

  • PRJNA407368 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27739197 27739197 PRJNA407368_S_NODE_7364_length_192_cov_2.546012_g7262_i0 PRJNA407368 7364 192 2.546012 4.88834304 Candidatus Omnitrophica bacterium CG23_combo_of_CG 2035772 Bacteria Bacteria 105 7.399999999999998e-25   NR PIP19855.1 1974757 g7262 i0 78.1 2 64 14 100 0 192 1 156 219 PIP19855.1 MAG: glucose-1-phosphate adenylyltransferase [Candidatus Omnitrophica bacterium CG23_combo_of_CG06-09_8_20_14_all_41_10] diamond 384 105 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota       Candidatus Sherwoodlollariibacterium Candidatus Sherwoodlollariibacterium unditelluris
29664483 29664483 PRJNA407368_S_NODE_1830_length_461_cov_3.939815_g1733_i0 PRJNA407368 1830 461 3.939815 18.16254715 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 119 2.85e-29   NR HRZ15357.1 2035772 g1733 i0 54.3 0.611713665943601 94 43 61.2 0 345 64 213 306 HRZ15357.1 phage major capsid protein [Candidatus Omnitrophota bacterium] diamond 282 119 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30170101 30170101 PRJNA407368_S_NODE_4912_length_252_cov_4.098655_g4810_i0 PRJNA407368 4912 252 4.098655 10.3286106 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 78.6 2.81e-15   NR MCG3176940.1 2035772 g4810 i0 53 0.785714285714286 66 31 78.6 0 10 207 32 97 MCG3176940.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 198 78.6 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32856492 32856492 PRJNA407368_S_NODE_1740_length_473_cov_8.211712_g1644_i0 PRJNA407368 1740 473 8.211712 38.84139776 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 192 3.039999999999999e-55   NR MDP3723116.1 2035772 g1644 i0 56.1 0.995771670190275 157 69 99.6 0 471 1 102 258 MDP3723116.1 cytochrome c biogenesis protein ResB [Candidatus Omnitrophota bacterium] diamond 471 192 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;