RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA407368", tax_clade = "Opisthokonta" and tax_phylum = "Zoopagomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA407368 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11284986 11284986 PRJNA407368_S_NODE_4489_length_268_cov_17.497908_g4387_i0 PRJNA407368 4489 268 17.497908 46.89439344 Dispira 78922 Fungi Fungi 91.6 5.2e-14   NTclustered gi|666440456|gb|KF848915.1| 78923 g4387 i0 94.828 1.99253731343284 58 3 22 0 211 268 2037 1980 Dispira cornuta strain NRRL A-16106 28S ribosomal RNA gene, partial sequence blastn 534 91.6 1 Eukaryota Opisthokonta Fungi Zoopagomycota Dimargaritomycetes Dimargaritales Dimargaritaceae Dispira Dispira cornuta
30454957 30454957 PRJNA407368_S_NODE_8873_length_170_cov_2.297872_g8771_i0 PRJNA407368 8873 170 2.297872 3.9063824 Syncephalis pseudoplumigaleata 1712513 Fungi Fungi 93.2 1.18e-20   NR RKP27337.1 1712513 g8771 i0 78.2 11.6647058823529 55 12 97.1 0 169 5 14 68 RKP27337.1 actin family [Syncephalis pseudoplumigaleata] diamond 1983 93.2 1 Eukaryota Opisthokonta Fungi Zoopagomycota Zoopagomycetes Zoopagales Piptocephalidaceae Syncephalis Syncephalis pseudoplumigaleata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;