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contig_metadata

4 rows where bioproject = "PRJNA407368", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Parcubacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Parcubacteria · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA407368 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27328443 27328443 PRJNA407368_S_NODE_9183_length_166_cov_1.992701_g9081_i0 PRJNA407368 9183 166 1.992701 3.30788366 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 76.6 7.25e-16   NR MEN9389315.1 2762014 g9081 i0 75.5 0.957831325301205 53 13 95.8 0 164 6 44 96 MEN9389315.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 159 76.6 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
28117610 28117610 PRJNA407368_S_NODE_5965_length_220_cov_10.790576_g5863_i0 PRJNA407368 5965 220 10.790576 23.7392672 Parcubacteria bacterium C7867- 2762014 Bacteria Bacteria 104 2.73e-24   NR KND46803.1 1659200 g5863 i0 65.3 0.981818181818182 72 25 98.2 0 5 220 35 106 KND46803.1 MAG: hypothetical protein AB201_03390 [Parcubacteria bacterium C7867-006] diamond 216 104 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Parcubacteria bacterium C7867-006
28639809 28639809 PRJNA407368_S_NODE_7967_length_182_cov_1.980392_g7865_i0 PRJNA407368 7967 182 1.980392 3.60431344 Bacillati 1783272 Bacteria Bacteria 56.2 1.73e-8   NR RJQ30280.1 2762014 g7865 i0 47.5 1.94505494505495 59 29 97.3 1 181 5 17 73 RJQ30280.1 MAG: hypothetical protein C4565_00415 [Candidatus Parcubacteria bacterium] diamond 354 56.6 0.992932862190813 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
32162063 32162063 PRJNA407368_S_NODE_6398_length_211_cov_2.824176_g6296_i0 PRJNA407368 6398 211 2.824176 5.95901136 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 115 5.72e-29   NR MEN9913036.1 2762014 g6296 i0 78.3 1.96208530805687 69 15 98.1 0 3 209 90 158 MEN9913036.1 type 4 fimbrial assembly protein PilB, type pilus assembly protein PilB [Candidatus Parcubacteria bacterium] diamond 414 115 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;