RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

12 rows where bioproject = "PRJNA407087" and tax_phylum = "Euglenozoa"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 12 ✖

tax_clade 1

bioproject 1

  • PRJNA407087 · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
414862 414862 PRJNA407087_S_NODE_10061_length_150_cov_2.305785_g9598_i0 PRJNA407087 10061 150 2.305785 3.4586775 Trypanosoma melophagium 715481 Euglenozoa other_Eukaryota 75 2.61e-9   NTclustered gi|2787711187|ref|XM_067330654.1| 715481 g9598 i0 89.655 0.386666666666667 58 6 39 0 18 75 12001 12058 Trypanosoma melophagium Dynein heavy chain (LSM04_005056), partial mRNA blastn 58 75 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma melophagium
5518749 5518749 PRJNA407087_S_NODE_8745_length_162_cov_1.894737_g8282_i0 PRJNA407087 8745 162 1.894737 3.06947394 Trypanosoma carassii 38249 Euglenozoa other_Eukaryota 86.7 1.47e-18   NR ABS01292.1 38249 g8282 i0 69.1 3.05555555555556 55 15 98.1 1 1 159 243 297 ABS01292.1 similar to activated kinase C receptor [Trypanosoma carassii] diamond 495 86.7 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma carassii
15717640 15717640 PRJNA407087_S_NODE_3093_length_346_cov_2.744479_g2630_i0 PRJNA407087 3093 346 2.744479 9.49589734 Leptomonas pyrrhocoris 157538 Euglenozoa other_Eukaryota 55.8 2.6e-6   NR XP_015658335.1 157538 g2630 i0 40 1.1271676300578 60 35 51.2 1 345 169 23 82 XP_015658335.1 putative ubiquitin-like protein [Leptomonas pyrrhocoris] diamond 390 55.8 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leptomonas Leptomonas pyrrhocoris
26902487 26902487 PRJNA407087_S_NODE_7061_length_184_cov_5.600000_g6598_i0 PRJNA407087 7061 184 5.6 10.304 Leishmania 5658 Euglenozoa other_Eukaryota 91.3 9.88e-20   NR CCM13476.1 5670 g6598 i0 71.7 2.93478260869565 60 17 97.8 0 184 5 346 405 CCM13476.1 isocitrate dehydrogenase [NADP], mitochondrial precursor, putative [Leishmania guyanensis] diamond 540 91.3 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania guyanensis
27265174 27265174 PRJNA407087_S_NODE_5783_length_211_cov_2.791209_g5320_i0 PRJNA407087 5783 211 2.791209 5.88945099 Trypanosoma grayi 71804 Euglenozoa other_Eukaryota 48.9 8.43e-5   NR XP_009314248.1 71804 g5320 i0 43.3 0.95260663507109 67 19 95.3 2 203 3 30 77 XP_009314248.1 ARP2/3 complex subunit [Trypanosoma grayi] diamond 201 48.9 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma grayi
28197429 28197429 PRJNA407087_S_NODE_4646_length_248_cov_4.082192_g4183_i0 PRJNA407087 4646 248 4.082192 10.12383616 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 47 0.00118   NR XP_015658335.1 157538 g4183 i0 43.4 1.23387096774194 53 28 61.7 2 247 95 31 83 XP_015658335.1 putative ubiquitin-like protein [Leptomonas pyrrhocoris] diamond 306 47.4 0.991561181434599 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leptomonas Leptomonas pyrrhocoris
30170094 30170094 PRJNA407087_S_NODE_5652_length_214_cov_3.351351_g5189_i0 PRJNA407087 5652 214 3.351351 7.17189114 Perkinsela sp. CCAP 156 1935466 Euglenozoa other_Eukaryota 89.7 6.8e-20   NR KNH05064.1 1314962 g5189 i0 60 6.82710280373832 70 28 98.1 0 3 212 68 137 KNH05064.1 20S proteasome subunit alpha [Perkinsela sp. CCAP 1560/4] diamond 1461 89.7 1 Eukaryota Discoba   Euglenozoa Kinetoplastea   Ichthyobodonidae Perkinsela Perkinsela sp. CCAP 1560/4
30913774 30913774 PRJNA407087_S_NODE_5434_length_220_cov_2.015707_g4971_i0 PRJNA407087 5434 220 2.015707 4.4345554 root 1 Root_unresolved Root_unresolved 98.6 6.17e-22   NR AAK95376.1 5691 g4971 i0 61.6 12.7363636363636 73 28 99.5 0 2 220 639 711 AAK95376.1 vacuolar-type proton translocating pyrophosphatase 1 [Trypanosoma brucei] diamond 2802 99 0.995959595959596 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma brucei
31040281 31040281 PRJNA407087_S_NODE_7195_length_182_cov_3.549020_g6732_i0 PRJNA407087 7195 182 3.54902 6.4592164 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 81.3 1.52e-16   NR CAD2218625.1 59799 g6732 i0 61.7 2.96703296703297 60 23 98.9 0 181 2 210 269 CAD2218625.1 Aminopeptidase I zinc metalloprotease (M18)/M42 glutamyl aminopeptidase, putative [Angomonas deanei] diamond 540 82 0.991463414634146 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Angomonas Angomonas deanei
31845356 31845356 PRJNA407087_S_NODE_4037_length_276_cov_4.368421_g3574_i0 PRJNA407087 4037 276 4.368421 12.05684196 Porcisia hertigi 2761500 Euglenozoa other_Eukaryota 79.7 4.24e-15   NR XP_067756176.1 2761500 g3574 i0 50 0.826086956521739 76 37 81.5 1 226 2 21 96 XP_067756176.1 hypothetical protein JKF63_03383 [Porcisia hertigi] diamond 228 79.7 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Porcisia Porcisia hertigi
31845362 31845362 PRJNA407087_S_NODE_6577_length_194_cov_2.509091_g6114_i0 PRJNA407087 6577 194 2.509091 4.86763654 Trypanosoma cruzi 5693 Euglenozoa other_Eukaryota 62 3e-9   NR XP_805149.1 5693 g6114 i0 44.4 7.79381443298969 63 35 97.4 0 191 3 222 284 XP_805149.1 aminopeptidase P, putative, partial [Trypanosoma cruzi] diamond 1512 62 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
32635931 32635931 PRJNA407087_S_NODE_9940_length_151_cov_2.213115_g9477_i0 PRJNA407087 9940 151 2.213115 3.34180365 Bodo saltans 75058 Euglenozoa other_Eukaryota 49.3 5.19e-5   NR CUI15234.1 75058 g9477 i0 48.9 1.90728476821192 47 24 93.4 0 151 11 293 339 CUI15234.1 fatty acid desaturase, putative [Bodo saltans] diamond 288 49.3 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;