RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA407087" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA407087 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27549299 27549299 PRJNA407087_S_NODE_9044_length_159_cov_1.953846_g8581_i0 PRJNA407087 9044 159 1.953846 3.10661514 Rozella allomycis CSF55 988480 Fungi Fungi 44.3 0.00335   NR EPZ35869.1 988480 g8581 i0 65.5 1.64150943396226 29 10 54.7 0 68 154 61 89 EPZ35869.1 Plus-3 domain-containing protein [Rozella allomycis CSF55] diamond 261 44.3 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
27833469 27833469 PRJNA407087_S_NODE_4284_length_264_cov_64.842553_g3821_i0 PRJNA407087 4284 264 64.842553 171.18433992 Rozella allomycis CSF55 988480 Fungi Fungi 83.6 3.57e-17   NR EPZ34692.1 988480 g3821 i0 66.2 3.56818181818182 65 21 72.7 1 28 219 190 254 EPZ34692.1 Nucleic acid-binding domain-containing protein [Rozella allomycis CSF55] diamond 942 83.6 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
30043777 30043777 PRJNA407087_S_NODE_5371_length_221_cov_24.395833_g4908_i0 PRJNA407087 5371 221 24.395833 53.91479093 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 107 9.75e-27   NR PJF17825.1 1246581 g4908 i0 71.8 2.89140271493213 71 19 96.4 1 215 3 1 70 PJF17825.1 hypothetical protein PSACC_02363 [Paramicrosporidium saccamoebae] diamond 639 107 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;