RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA407087", tax_phylum = "Chloroflexota" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 2 ✖

tax_phylum 1

  • Chloroflexota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA407087 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27360058 27360058 PRJNA407087_S_NODE_5183_length_228_cov_2.919598_g4720_i0 PRJNA407087 5183 228 2.919598 6.65668344 Caldilinea 233191 Bacteria Bacteria 42.4 0.0377   NR WP_014433997.1 233191 g4720 i0 37.3 0.986842105263158 75 41 98.7 3 225 1 9 77 WP_014433997.1 MULTISPECIES: thioredoxin [Caldilinea] diamond 225 42.4 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae Caldilinea  
32635923 32635923 PRJNA407087_S_NODE_5360_length_222_cov_2.347150_g4897_i0 PRJNA407087 5360 222 2.34715 5.210673 Anaerolineaceae bacterium 4572_32.2 1971624 Bacteria Bacteria 67 3.17e-11   NR OQY23619.1 1971624 g4897 i0 54.4 6.01351351351351 57 26 77 0 46 216 130 186 OQY23619.1 MAG: 50S ribosomal protein L1 [Anaerolineaceae bacterium 4572_32.2] diamond 1335 67 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae   Anaerolineaceae bacterium 4572_32.2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;