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contig_metadata

14 rows where bioproject = "PRJNA407087" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 14 ✖

tax_kingdom 1

bioproject 1

  • PRJNA407087 · 14 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27075440 27075440 PRJNA407087_S_NODE_9742_length_152_cov_4.853659_g9279_i0 PRJNA407087 9742 152 4.853659 7.37756168 Acidobacteriota bacterium 1978231 Bacteria Bacteria 42.7 0.00787   NR MFP5230548.1 1978231 g9279 i0 72 2.17105263157895 25 7 49.3 0 78 152 2 26 MFP5230548.1 trans-sulfuration enzyme family protein [Acidobacteriota bacterium] diamond 330 42.7 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27802122 27802122 PRJNA407087_S_NODE_8544_length_164_cov_2.481481_g8081_i0 PRJNA407087 8544 164 2.481481 4.06962884 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 70.1 2.11e-12   NR HVT04722.1 2651171 g8081 i0 67.4 4.09756097560976 46 15 84.1 0 1 138 280 325 HVT04722.1 alpha-ketoacid dehydrogenase subunit beta [Thermoanaerobaculia bacterium] diamond 672 70.1 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
28906848 28906848 PRJNA407087_S_NODE_1668_length_517_cov_3.594262_g1235_i0 PRJNA407087 1668 517 3.594262 18.58233454 Acidobacteriota bacterium 1978231 Bacteria Bacteria 152 1.36e-40   NR MDQ3684652.1 1978231 g1235 i0 42.7 0.992263056092843 171 97 99.2 1 3 515 182 351 MDQ3684652.1 Xaa-Pro aminopeptidase [Acidobacteriota bacterium] diamond 513 152 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29254159 29254159 PRJNA407087_S_NODE_669_length_915_cov_14.645598_g415_i0 PRJNA407087 669 915 14.645598 134.0072217 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 333 3.72e-111   NR MFN7922683.1 2212468 g415 i0 58.1 7.31803278688525 279 113 91.5 1 909 73 6 280 MFN7922683.1 aldolase/citrate lyase family protein [Bryobacteraceae bacterium] diamond 6696 333 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
29790959 29790959 PRJNA407087_S_NODE_2651_length_386_cov_3.985994_g2190_i0 PRJNA407087 2651 386 3.985994 15.38593684 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 54.7 7.59e-6   NR HJR06586.1 2283092 g2190 i0 35.4 2.09844559585492 127 78 97.9 3 380 3 62 185 HJR06586.1 CAP domain-containing protein [Pyrinomonadaceae bacterium] diamond 810 54.7 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
29980702 29980702 PRJNA407087_S_NODE_3011_length_352_cov_5.256966_g2549_i0 PRJNA407087 3011 352 5.256966 18.50452032 Acidobacteriaceae bacterium 2052142 Bacteria Bacteria 164 2.2e-45   NR MDR3736461.1 2052142 g2549 i0 66.7 1.99431818181818 117 39 99.7 0 352 2 75 191 MDR3736461.1 chaperonin GroEL [Acidobacteriaceae bacterium] diamond 702 164 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   Acidobacteriaceae bacterium
29980709 29980709 PRJNA407087_S_NODE_5991_length_206_cov_2.598870_g5528_i0 PRJNA407087 5991 206 2.59887 5.3536722 Acidobacteriota bacterium 1978231 Bacteria Bacteria 42 0.044   NR MDE2851875.1 1978231 g5528 i0 47.1 0.495145631067961 34 18 49.5 0 204 103 1042 1075 MDE2851875.1 DEAD/DEAH box helicase [Acidobacteriota bacterium] diamond 102 42 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
30643995 30643995 PRJNA407087_S_NODE_2853_length_366_cov_8.109792_g2391_i0 PRJNA407087 2853 366 8.109792 29.68183872 Acidobacteriota bacterium 1978231 Bacteria Bacteria 68.9 7.47e-11   NR MCB1025656.1 1978231 g2391 i0 40.5 1.18852459016393 79 47 64.8 0 3 239 131 209 MCB1025656.1 hypothetical protein [Acidobacteriota bacterium] diamond 435 68.9 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
30770699 30770699 PRJNA407087_S_NODE_5134_length_230_cov_3.358209_g4671_i0 PRJNA407087 5134 230 3.358209 7.7238807 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 49.3 1.43e-4   NR MEO6392033.1 2283092 g4671 i0 48.9 1.0304347826087 45 23 58.7 0 216 82 176 220 MEO6392033.1 CAP domain-containing protein [Pyrinomonadaceae bacterium] diamond 237 49.3 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
31546058 31546058 PRJNA407087_S_NODE_1156_length_657_cov_7.648089_g784_i0 PRJNA407087 1156 657 7.648089 50.24794473 Bacteria 2 Bacteria Bacteria 224 1.1399999999999999e-69   NR MBI1358074.1 1978231 g784 i0 55.7 18.4246575342466 192 81 87.7 1 652 77 92 279 MBI1358074.1 hypothetical protein [Acidobacteriota bacterium] diamond 12105 225 0.995555555555556 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31592623 31592623 PRJNA407087_S_NODE_4056_length_275_cov_3.764228_g3593_i0 PRJNA407087 4056 275 3.764228 10.351627 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 65.9 1.73e-10   NR HEV7744066.1 2283092 g3593 i0 42.7 0.970909090909091 89 51 97.1 0 270 4 62 150 HEV7744066.1 CAP domain-containing protein [Pyrinomonadaceae bacterium] diamond 267 65.9 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
32098566 32098566 PRJNA407087_S_NODE_4118_length_272_cov_4.209877_g3655_i0 PRJNA407087 4118 272 4.209877 11.45086544 Acidobacteriota bacterium 1978231 Bacteria Bacteria 61.6 7.56e-10   NR MBI3665728.1 1978231 g3655 i0 41.7 1.77573529411765 72 41 78.3 1 5 217 36 107 MBI3665728.1 RNA-binding protein [Acidobacteriota bacterium] diamond 483 61.6 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32162049 32162049 PRJNA407087_S_NODE_3718_length_294_cov_7.547170_g3255_i0 PRJNA407087 3718 294 7.54717 22.1886798 Acidobacteriota bacterium 1978231 Bacteria Bacteria 70.1 1.25e-11   NR MCB1025656.1 1978231 g3255 i0 50 1.30612244897959 62 31 63.3 0 292 107 131 192 MCB1025656.1 hypothetical protein [Acidobacteriota bacterium] diamond 384 70.1 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32825087 32825087 PRJNA407087_S_NODE_1600_length_532_cov_22.292247_g545_i2 PRJNA407087 1600 532 22.292247 118.59475404 Acidobacteriota bacterium 1978231 Bacteria Bacteria 59.3 8.81e-7   NR MBS1873370.1 1978231 g545 i2 34.4 0.704887218045113 125 60 68.8 5 442 77 112 217 MBS1873370.1 hypothetical protein [Acidobacteriota bacterium] diamond 375 59.3 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;