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contig_metadata

30 rows where bioproject = "PRJNA407087", tax_kingdom = "Metazoa" and tax_phylum = "Nematoda"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nematoda · 30 ✖

tax_kingdom 1

  • Metazoa · 30 ✖

tax_clade 1

bioproject 1

  • PRJNA407087 · 30 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
414890 414890 PRJNA407087_S_NODE_2581_length_393_cov_65.689560_g2120_i0 PRJNA407087 2581 393 65.68956 258.1599708 Pristionchus maxplancki 1317128 Nematoda Nematoda 111 6.11e-20   NTclustered gi|478487035|gb|KC491697.1| 1317128 g2120 i0 92.308 8.53435114503817 78 6 20 0 234 311 207 284 Pristionchus maxplancki strain RS5594 small subunit ribosomal protein 8 (rps8) gene, partial cds blastn 3354 111 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus maxplancki
6184725 6184725 PRJNA407087_S_NODE_2005_length_465_cov_14.490826_g1553_i0 PRJNA407087 2005 465 14.490826 67.3823409 Caenorhabditis brenneri 135651 Nematoda Nematoda 112 2.98e-28   NR EGT34536.1 135651 g1553 i0 57.9 1.83870967741935 95 40 61.3 0 342 58 40 134 EGT34536.1 hypothetical protein CAEBREN_26317 [Caenorhabditis brenneri] diamond 855 112 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis brenneri
6184726 6184726 PRJNA407087_S_NODE_2305_length_424_cov_18.458228_g1844_i0 PRJNA407087 2305 424 18.458228 78.26288672 Caenorhabditis brenneri 135651 Nematoda Nematoda 112 9.1e-29   NR EGT34536.1 135651 g1844 i0 56.1 1.37264150943396 98 43 69.3 0 351 58 37 134 EGT34536.1 hypothetical protein CAEBREN_26317 [Caenorhabditis brenneri] diamond 582 112 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis brenneri
14443870 14443870 PRJNA407087_S_NODE_2412_length_413_cov_5.049479_g1951_i0 PRJNA407087 2412 413 5.049479 20.85434827 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 132 1.83e-34   NR NP_001369965.1 6239 g1951 i0 67.8 17.4842615012107 87 28 63.2 0 411 151 264 350 NP_001369965.1 Peptidase C1A papain C-terminal domain-containing protein [Caenorhabditis elegans] diamond 7221 133 0.992481203007519 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
27012121 27012121 PRJNA407087_S_NODE_4722_length_245_cov_3.060185_g4259_i0 PRJNA407087 4722 245 3.060185 7.49745325 Gnathostoma spinigerum 75299 Nematoda Nematoda 62.8 3.29e-9   NR MFH4979344.1 75299 g4259 i0 43 4.81224489795918 79 45 96.7 0 238 2 140 218 MFH4979344.1 hypothetical protein [Gnathostoma spinigerum] diamond 1179 62.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Gnathostomatidae Gnathostoma Gnathostoma spinigerum
27896581 27896581 PRJNA407087_S_NODE_4285_length_264_cov_28.489362_g3822_i0 PRJNA407087 4285 264 28.489362 75.21191568 Pristionchus fissidentatus 1538716 Nematoda Nematoda 95.9 1.56e-23   NR GMT14341.1 1538716 g3822 i0 62.7 1.69318181818182 75 27 85.2 1 264 40 25 98 GMT14341.1 hypothetical protein PFISCL1PPCAC_5638, partial [Pristionchus fissidentatus] diamond 447 95.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus fissidentatus
27913209 27913209 PRJNA407087_S_NODE_7845_length_173_cov_2.097222_g7382_i0 PRJNA407087 7845 173 2.097222 3.62819406 root 1 Root_unresolved Root_unresolved 51.6 1.02e-5   NR TKR68589.1 34508 g7382 i0 65.8 3.78034682080925 38 13 65.9 0 60 173 2 39 TKR68589.1 hypothetical protein L596_024553 [Steinernema carpocapsae] diamond 654 52 0.992307692307692 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Steinernematidae Steinernema Steinernema carpocapsae
27976506 27976506 PRJNA407087_S_NODE_1185_length_650_cov_3.911433_g812_i0 PRJNA407087 1185 650 3.911433 25.4243145 Caenorhabditis 6237 Nematoda Nematoda 134 4.22e-34   NR NP_504638.1 6239 g812 i0 37.1 5.84307692307692 210 123 93.2 5 623 18 41 249 NP_504638.1 NADH-cytochrome b5 reductase [Caenorhabditis elegans] diamond 3798 134 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
28117600 28117600 PRJNA407087_S_NODE_5565_length_216_cov_3.395722_g5102_i0 PRJNA407087 5565 216 3.395722 7.33475952 Bursaphelenchus xylophilus 6326 Nematoda Nematoda 73.9 2.57e-13   NR CAD5210176.1 6326 g5102 i0 52.9 0.972222222222222 70 32 95.8 1 208 2 54 123 CAD5210176.1 unnamed protein product [Bursaphelenchus xylophilus] diamond 210 73.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Bursaphelenchus Bursaphelenchus xylophilus
28355343 28355343 PRJNA407087_S_NODE_2346_length_419_cov_20.241026_g1885_i0 PRJNA407087 2346 419 20.241026 84.80989894 Opisthokonta 33154 Nematoda Nematoda 90.9 6.57e-19   NR VDD94551.1 51028 g1885 i0 40 14.2267303102625 120 70 85.9 2 378 19 7 124 VDD94551.1 unnamed protein product [Enterobius vermicularis] diamond 5961 90.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Oxyuridae Enterobius Enterobius vermicularis
28749205 28749205 PRJNA407087_S_NODE_2867_length_365_cov_3.806548_g2405_i0 PRJNA407087 2867 365 3.806548 13.8939002 Mesorhabditis spiculigera 96644 Nematoda Nematoda 68.6 5.42e-12   NR CAJ0577106.1 96644 g2405 i0 40.6 1.63561643835616 96 47 76.4 4 48 326 8 96 CAJ0577106.1 unnamed protein product, partial [Mesorhabditis spiculigera] diamond 597 68.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Mesorhabditis Mesorhabditis spiculigera
29113308 29113308 PRJNA407087_S_NODE_4808_length_242_cov_2.877934_g4345_i0 PRJNA407087 4808 242 2.877934 6.96460028 Rhabditida 6236 Nematoda Nematoda 114 3.21e-27   NR KIH66348.1 51022 g4345 i0 61.5 7.78512396694215 78 30 96.7 0 241 8 286 363 KIH66348.1 Hsp90 protein [Ancylostoma duodenale] diamond 1884 114 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Ancylostoma Ancylostoma duodenale
29428721 29428721 PRJNA407087_S_NODE_6509_length_195_cov_3.385542_g6046_i0 PRJNA407087 6509 195 3.385542 6.6018069 Metazoa 33208 Nematoda Nematoda 99 3.0800000000000003e-22   NR UMM22293.1 6238 g6046 i0 74.6 12.6 63 16 96.9 0 191 3 589 651 UMM22293.1 hypothetical protein L5515_003579 [Caenorhabditis briggsae] diamond 2457 100 0.99 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis briggsae
29759412 29759412 PRJNA407087_S_NODE_5191_length_227_cov_30.303030_g4728_i0 PRJNA407087 5191 227 30.30303 68.7878781 Anisakis simplex 6269 Nematoda Nematoda 53.1 7.99e-7   NR VDK28727.1 6269 g4728 i0 52.2 0.607929515418502 46 22 60.8 0 140 3 31 76 VDK28727.1 unnamed protein product [Anisakis simplex] diamond 138 53.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Anisakidae Anisakis Anisakis simplex
29854363 29854363 PRJNA407087_S_NODE_2071_length_457_cov_57.567757_g1615_i0 PRJNA407087 2071 457 57.567757 263.08464949 Pristionchus fissidentatus 1538716 Nematoda Nematoda 92.8 5.170000000000001e-21   NR GMT18625.1 1538716 g1615 i0 42 0.859956236323851 131 70 85.3 3 18 407 1 126 GMT18625.1 hypothetical protein PFISCL1PPCAC_9922 [Pristionchus fissidentatus] diamond 393 92.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus fissidentatus
30155061 30155061 PRJNA407087_S_NODE_6552_length_194_cov_4.654545_g6089_i0 PRJNA407087 6552 194 4.654545 9.0298173 Opisthokonta 33154 Nematoda Nematoda 110 2.87e-28   NR NP_502077.1 6239 g6089 i0 98.2 199.871134020619 56 1 86.6 0 194 27 155 210 NP_502077.1 Small ribosomal subunit protein uS7 [Caenorhabditis elegans] diamond 38775 110 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
30265322 30265322 PRJNA407087_S_NODE_3652_length_299_cov_5.148148_g3189_i0 PRJNA407087 3652 299 5.148148 15.39296252 Mesorhabditis spiculigera 96644 Nematoda Nematoda 84.3 1.25e-16   NR CAJ0559936.1 96644 g3189 i0 42.9 1.96655518394649 98 54 96.3 1 288 1 192 289 CAJ0559936.1 unnamed protein product, partial [Mesorhabditis spiculigera] diamond 588 84.3 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Mesorhabditis Mesorhabditis spiculigera
30439893 30439893 PRJNA407087_S_NODE_7913_length_172_cov_2.195804_g7450_i0 PRJNA407087 7913 172 2.195804 3.77678288 Metazoa 33208 Nematoda Nematoda 85.9 9.12e-18   NR KHN72871.1 6265 g7450 i0 66.7 35.6860465116279 57 19 99.4 0 172 2 1491 1547 KHN72871.1 Bifunctional glutamate/proline--tRNA ligase [Toxocara canis] diamond 6138 86.3 0.995365005793743 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis
31086519 31086519 PRJNA407087_S_NODE_2235_length_433_cov_5.400990_g1774_i0 PRJNA407087 2235 433 5.40099 23.3862867 Diploscapter pachys 2018661 Nematoda Nematoda 190 4.8e-57   NR PAV75969.1 2018661 g1774 i0 61.4 8.83371824480369 140 54 97 0 11 430 5 144 PAV75969.1 hypothetical protein WR25_01581 isoform C [Diploscapter pachys] diamond 3825 190 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Diploscapter Diploscapter pachys
31103087 31103087 PRJNA407087_S_NODE_515_length_1048_cov_12.421001_g315_i0 PRJNA407087 515 1048 12.421001 130.17209048 Metazoa 33208 Nematoda Nematoda 321 1.1599999999999999e-104   NR XP_064059976.1 51031 g315 i0 52.7 9.58396946564885 311 133 88.2 6 948 25 45 344 XP_064059976.1 hypothetical protein RB195_014013 [Necator americanus] diamond 10044 323 0.993808049535604 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Necator Necator americanus
31402840 31402840 PRJNA407087_S_NODE_9516_length_154_cov_3.640000_g9053_i0 PRJNA407087 9516 154 3.64 5.6056 Anisakis simplex 6269 Nematoda Nematoda 50.4 3.38e-6   NR VDK36830.1 6269 g9053 i0 48.9 0.915584415584416 47 24 91.6 0 154 14 26 72 VDK36830.1 unnamed protein product, partial [Anisakis simplex] diamond 141 50.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Anisakidae Anisakis Anisakis simplex
32257161 32257161 PRJNA407087_S_NODE_4258_length_266_cov_2.502110_g3795_i0 PRJNA407087 4258 266 2.50211 6.6556126 Pristionchus mayeri 1317129 Nematoda Nematoda 42 0.0431   NR GMR58012.1 1317129 g3795 i0 37.2 0.879699248120301 78 33 69.9 2 62 247 46 123 GMR58012.1 hypothetical protein PMAYCL1PPCAC_28207, partial [Pristionchus mayeri] diamond 234 42 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus mayeri
32288819 32288819 PRJNA407087_S_NODE_6739_length_191_cov_2.462963_g6276_i0 PRJNA407087 6739 191 2.462963 4.70425933 Parelaphostrongylus tenuis 148309 Nematoda Nematoda 55.5 3.29e-7   NR KAJ1358478.1 148309 g6276 i0 39.7 0.989528795811518 63 34 99 1 3 191 6 64 KAJ1358478.1 hypothetical protein KIN20_016909 [Parelaphostrongylus tenuis] diamond 189 55.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Metastrongylidae Parelaphostrongylus Parelaphostrongylus tenuis
32288821 32288821 PRJNA407087_S_NODE_9459_length_155_cov_2.087302_g8996_i0 PRJNA407087 9459 155 2.087302 3.2353181 Gnathostoma spinigerum 75299 Nematoda Nematoda 68.2 1.83e-12   NR MFH4979583.1 75299 g8996 i0 59.2 6.44516129032258 49 20 94.8 0 5 151 126 174 MFH4979583.1 hypothetical protein [Gnathostoma spinigerum] diamond 999 68.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Gnathostomatidae Gnathostoma Gnathostoma spinigerum
32351968 32351968 PRJNA407087_S_NODE_9519_length_154_cov_3.616000_g9056_i0 PRJNA407087 9519 154 3.616 5.56864 Onchocerca ochengi 42157 Nematoda Nematoda 74.3 1.61e-14   NR VDM91631.1 42157 g9056 i0 60 1.94805194805195 50 20 97.4 0 1 150 58 107 VDM91631.1 unnamed protein product [Onchocerca ochengi] diamond 300 74.3 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Onchocerca Onchocerca ochengi
32431820 32431820 PRJNA407087_S_NODE_859_length_792_cov_67.821756_g312_i1 PRJNA407087 859 792 67.821756 537.14830752 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 151 4.9199999999999996e-40   NR KAL3073343.1 157864 g312 i1 41.7 8.03787878787879 192 112 72.7 0 748 173 75 266 KAL3073343.1 hypothetical protein niasHT_038700 [Heterodera trifolii] diamond 6366 152 0.993421052631579 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heteroderidae Heterodera Heterodera trifolii
32573444 32573444 PRJNA407087_S_NODE_5539_length_217_cov_2.228723_g5076_i0 PRJNA407087 5539 217 2.228723 4.83632891 Parelaphostrongylus tenuis 148309 Nematoda Nematoda 42.4 0.0365   NR KAJ1369248.1 148309 g5076 i0 63 0.373271889400922 27 10 37.3 0 4 84 193 219 KAJ1369248.1 hypothetical protein KIN20_030662 [Parelaphostrongylus tenuis] diamond 81 42.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Metastrongylidae Parelaphostrongylus Parelaphostrongylus tenuis
32573446 32573446 PRJNA407087_S_NODE_7319_length_180_cov_3.543046_g6856_i0 PRJNA407087 7319 180 3.543046 6.3774828 Parelaphostrongylus tenuis 148309 Nematoda Nematoda 45.1 0.00204   NR KAJ1358478.1 148309 g6856 i0 46.2 1.3 39 21 65 0 1 117 32 70 KAJ1358478.1 hypothetical protein KIN20_016909 [Parelaphostrongylus tenuis] diamond 234 45.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Metastrongylidae Parelaphostrongylus Parelaphostrongylus tenuis
32778578 32778578 PRJNA407087_S_NODE_9800_length_152_cov_2.317073_g9337_i0 PRJNA407087 9800 152 2.317073 3.52195096 Opisthokonta 33154 Nematoda Nematoda 51.6 7.92e-6   NR CAJ0574817.1 96644 g9337 i0 55.3 1.71710526315789 38 17 75 0 115 2 329 366 CAJ0574817.1 unnamed protein product, partial [Mesorhabditis spiculigera] diamond 261 51.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Mesorhabditis Mesorhabditis spiculigera
32887869 32887869 PRJNA407087_S_NODE_2040_length_460_cov_40.095128_g1587_i0 PRJNA407087 2040 460 40.095128 184.4375888 Pristionchus fissidentatus 1538716 Nematoda Nematoda 92.4 7.550000000000001e-21   NR GMT18625.1 1538716 g1587 i0 42.4 0.860869565217391 132 69 85.4 3 443 51 1 126 GMT18625.1 hypothetical protein PFISCL1PPCAC_9922 [Pristionchus fissidentatus] diamond 396 92.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus fissidentatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;