RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA407087" and tax_kingdom = "Bamfordvirae"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 3 ✖

bioproject 1

  • PRJNA407087 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30945345 30945345 PRJNA407087_S_NODE_5454_length_219_cov_3.473684_g4991_i0 PRJNA407087 5454 219 3.473684 7.60736796 Tupanvirus 2094720 Viruses Viruses 53.9 2.22e-6   NR YP_010782374.1 2126985 g4991 i0 33.3 1.84931506849315 69 46 94.5 0 9 215 147 215 YP_010782374.1 hypothetical protein QJ857_gp0333 [Tupanvirus soda lake] diamond 405 53.9 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Tupanvirus Tupanvirus salinum
31529328 31529328 PRJNA407087_S_NODE_3536_length_308_cov_2.093190_g3073_i0 PRJNA407087 3536 308 2.09319 6.4470252 Fadolivirus algeromassiliense 3060017 Viruses Viruses 126 3.12e-32   NR YP_010803269.1 3060017 g3073 i0 65.5 0.847402597402597 87 30 84.7 0 307 47 328 414 YP_010803269.1 ornithine decaroboxylase [Fadolivirus algeromassiliense] diamond 261 126 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Fadolivirus Fadolivirus algeromassiliense
32762104 32762104 PRJNA407087_S_NODE_7500_length_178_cov_2.255034_g7037_i0 PRJNA407087 7500 178 2.255034 4.01396052 Fadolivirus algeromassiliense 3060017 Viruses Viruses 93.2 1.6e-20   NR YP_010803269.1 3060017 g7037 i0 72.9 0.99438202247191 59 16 99.4 0 2 178 130 188 YP_010803269.1 ornithine decaroboxylase [Fadolivirus algeromassiliense] diamond 177 93.2 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Fadolivirus Fadolivirus algeromassiliense

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;