RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA407087", tax_clade = "Bacteria candidate phyla" and tax_phylum = "candidate division WOR-3"

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tax_superkingdom 1

tax_phylum 1

  • candidate division WOR-3 · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA407087 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28702847 28702847 PRJNA407087_S_NODE_3487_length_312_cov_2.996466_g3024_i0 PRJNA407087 3487 312 2.996466 9.34897392 Bacteria 2 Bacteria Bacteria 90.5 8.47e-19   NR MCS7245191.1 2052148 g3024 i0 44.7 3.98076923076923 103 51 99 2 312 4 298 394 MCS7245191.1 ornithine--oxo-acid transaminase [candidate division WOR-3 bacterium] diamond 1242 90.9 0.995599559955996 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium
32887881 32887881 PRJNA407087_S_NODE_8780_length_161_cov_4.204545_g8317_i0 PRJNA407087 8780 161 4.204545 6.76931745 candidate division WOR-3 bacterium 2052148 Bacteria Bacteria 55.1 9.18e-8   NR MCX7785919.1 2052148 g8317 i0 58.3 5.29192546583851 48 18 89.4 1 144 1 12 57 MCX7785919.1 RidA family protein [candidate division WOR-3 bacterium] diamond 852 55.1 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;