RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA407087", tax_clade = "Apusozoa" and tax_superkingdom = "Eukaryota"

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tax_superkingdom 1

  • Eukaryota · 1 ✖

tax_clade 1

  • Apusozoa · 1 ✖

bioproject 1

  • PRJNA407087 · 1 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23367073 23367073 PRJNA407087_S_NODE_6899_length_187_cov_6.658228_g6436_i0 PRJNA407087 6899 187 6.658228 12.45088636 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 80.9 5.72e-16   NR XP_013761507.1 461836 g6436 i0 69.4 6.70588235294118 49 15 78.6 0 40 186 43 91 XP_013761507.1 elongation factor Tu [Thecamonas trahens ATCC 50062] diamond 1254 80.9 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;