RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA404067" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA404067 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14443608 14443608 PRJNA404067_P_NODE_30832_length_209_cov_7.783784_g30445_i0 PRJNA404067 30832 209 7.783784 16.26810856 Kickxella alabastrina 61397 Fungi Fungi 52.8 0.018   NTclustered gi|2323999340|ref|XM_051534057.1| 61397 g30445 i0 100 0.133971291866029 28 0 13 0 180 207 2655 2628 Kickxella alabastrina P-loop containing nucleoside triphosphate hydrolase protein (BX661DRAFT_175390), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Kickxella Kickxella alabastrina
23366924 23366924 PRJNA404067_P_NODE_41559_length_190_cov_2.720930_g41172_i0 PRJNA404067 41559 190 2.72093 5.169767 Entomophaga aulicae 39303 Fungi Fungi 326 8.71e-85   NTclustered gi|1373048|gb|U35394.1|EAU35394 39303 g41172 i0 97.872 22.1473684210526 188 4 99 0 1 188 3449 3636 Entomophaga aulicae 18S, ITS-1, 5.8S, ITS-2, and 25S ribosomal RNA genes blastn 4208 326 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Entomophthoraceae Entomophaga Entomophaga aulicae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;