RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA404067" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA404067 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29759403 29759403 PRJNA404067_P_NODE_28151_length_215_cov_1.909091_g27764_i0 PRJNA404067 28151 215 1.909091 4.10454565 Thermoplasmatota archaeon 2806419 Archaea Archaea 56.2 3.59e-7   NR MDY6986413.1 2806419 g27764 i0 38.6 2.88837209302326 70 42 97.7 1 2 211 132 200 MDY6986413.1 zonular occludens toxin domain-containing protein [Thermoplasmatota archaeon] diamond 621 56.2 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
32052024 32052024 PRJNA404067_P_NODE_38518_length_201_cov_1.150000_g38131_i0 PRJNA404067 38518 201 1.15 2.3115 Archaea 2157 Archaea Archaea 119 5.51e-30   NR KQM10597.1 1713725 g38131 i0 93.9 1.97014925373134 66 4 98.5 0 3 200 212 277 KQM10597.1 hypothetical protein AOA81_01550 [Methanomassiliicoccales archaeon RumEn M2] diamond 396 119 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales     Methanomassiliicoccales archaeon RumEn M2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;