RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA404067" and tax_phylum = "Rotifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Rotifera · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA404067 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1689649 1689649 PRJNA404067_P_NODE_38242_length_201_cov_1.657143_g37855_i0 PRJNA404067 38242 201 1.657143 3.33085743 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 130 8.62e-36   NR CAF0705395.1 104777 g37855 i0 95.5 1 67 3 100 0 201 1 192 258 CAF0705395.1 unnamed protein product [Brachionus calyciflorus] diamond 201 130 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
4241702 4241702 PRJNA404067_P_NODE_27824_length_216_cov_1.361290_g27437_i0 PRJNA404067 27824 216 1.3612899999999999 2.9403864 Gastropus stylifer 1917129 Rotifera other_Eukaryota 394 2.75e-105   NTclustered gi|1845957825|gb|MT522649.1| 1917129 g27437 i0 99.537 99.8888888888889 216 1 100 0 1 216 657 872 Gastropus stylifer isolate JH_001E10 small subunit ribosomal RNA gene, partial sequence blastn 21576 394 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Gastropodidae Gastropus Gastropus stylifer
5518549 5518549 PRJNA404067_P_NODE_36385_length_203_cov_1.225352_g35998_i0 PRJNA404067 36385 203 1.225352 2.48746456 Adineta vaga 104782 Rotifera other_Eukaryota 348 2.0100000000000006e-91   NTclustered gi|259129963|gb|GQ398061.1| 104782 g35998 i0 98.01 83.6995073891626 201 2 98 2 5 203 6768 6968 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 16991 348 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
26885800 26885800 PRJNA404067_P_NODE_31761_length_208_cov_1.632653_g31374_i0 PRJNA404067 31761 208 1.632653 3.39591824 Adineta ricciae 249248 Rotifera other_Eukaryota 97.1 1.8e-21   NR CAF1047051.1 249248 g31374 i0 62.3 1.99038461538462 69 26 99.5 0 207 1 238 306 CAF1047051.1 unnamed protein product [Adineta ricciae] diamond 414 97.1 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
30328731 30328731 PRJNA404067_P_NODE_30032_length_211_cov_1.653333_g29645_i0 PRJNA404067 30032 211 1.653333 3.48853263 Rotaria magnacalcarata 392030 Rotifera other_Eukaryota 68.2 2.7e-11   NR CAF4212263.1 392030 g29645 i0 44.8 1.90521327014218 67 37 95.3 0 10 210 299 365 CAF4212263.1 unnamed protein product, partial [Rotaria magnacalcarata] diamond 402 68.2 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria magnacalcarata
31830357 31830357 PRJNA404067_P_NODE_23817_length_226_cov_1.115152_g23430_i0 PRJNA404067 23817 226 1.115152 2.52024352 Adineta 104781 Rotifera other_Eukaryota 42.4 0.0361   NR CAF1494377.1 249248 g23430 i0 53.3 1.2212389380531 30 14 39.8 0 125 214 45 74 CAF1494377.1 unnamed protein product [Adineta ricciae] diamond 276 42.4 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;