RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA404067" and tax_phylum = "Pisuviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA404067 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1689728 1689728 PRJNA404067_P_NODE_6402_length_491_cov_459.460465_g6026_i0 PRJNA404067 6402 491 459.460465 2255.95088315 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.013   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g6026 i0 96.875 0.122199592668024 32 1 7 0 460 491 44 13 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 60 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
2965332 2965332 PRJNA404067_P_NODE_2643_length_1301_cov_10.150806_g2395_i0 PRJNA404067 2643 1301 10.150806 132.06198606 Dolerus tritici iflavirus 1 3350209 Viruses Viruses 56.5 0.01   NTclustered gi|2833733277|gb|PQ323359.2| 3350209 g2395 i0 100 0.0453497309761722 30 0 2 0 1272 1301 85 56 Dolerus tritici iflavirus 1 isolate HN-WS polyprotein gene, complete cds blastn 59 56.5 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Dolerus tritici iflavirus 1
29917604 29917604 PRJNA404067_P_NODE_10011_length_347_cov_2.916084_g9626_i0 PRJNA404067 10011 347 2.916084 10.11881148 Tuatara cloaca-associated picornavirus-1 2970602 Viruses Viruses 61.2 3.84e-8   NR UUV42596.1 2970602 g9626 i0 34.9 0.942363112391931 109 68 91.6 1 20 337 129 237 UUV42596.1 MAG: polyprotein, partial [Tuatara cloaca-associated picornavirus-1] diamond 327 61.2 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Tuatara cloaca-associated picornavirus-1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;