RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA404067" and tax_phylum = "Candidatus Tayloriibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Tayloriibacteriota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA404067 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13168547 13168547 PRJNA404067_P_NODE_36851_length_203_cov_0.866197_g36464_i0 PRJNA404067 36851 203 0.866197 1.75837991 Candidatus Tayloriibacteriota bacterium 2052153 Bacteria Bacteria 133 3.3499999999999993e-34   NR MDB5204056.1 2052153 g36464 i0 100 0.990147783251232 67 0 99 0 1 201 362 428 MDB5204056.1 DNA-directed polymerase subunit beta, DNA-directed polymerase subunit beta [Candidatus Taylorbacteria bacterium] diamond 201 133 1 Bacteria Bacteria candidate phyla   Candidatus Tayloriibacteriota         Candidatus Tayloriibacteriota bacterium
27644329 27644329 PRJNA404067_P_NODE_34264_length_205_cov_1.819444_g33877_i0 PRJNA404067 34264 205 1.819444 3.7298602 Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_ 1802308 Bacteria Bacteria 92 2.89e-21   NR OHA24123.1 1802308 g33877 i0 76.4 1.60975609756098 55 13 80.5 0 1 165 58 112 OHA24123.1 MAG: hypothetical protein A3D50_01115 [Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_02_FULL_44_12] diamond 330 92 1 Bacteria Bacteria candidate phyla   Candidatus Tayloriibacteriota         Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_02_FULL_44_12
30360266 30360266 PRJNA404067_P_NODE_35532_length_204_cov_0.895105_g35145_i0 PRJNA404067 35532 204 0.895105 1.8260142 Candidatus Tayloriibacteriota bacterium 2052153 Bacteria Bacteria 72.8 3.53e-14   NR MDB5204220.1 2052153 g35145 i0 95 0.588235294117647 40 2 58.8 0 124 5 1 40 MDB5204220.1 ribosomal protein small subunit ribosomal protein [Candidatus Taylorbacteria bacterium] diamond 120 72.8 1 Bacteria Bacteria candidate phyla   Candidatus Tayloriibacteriota         Candidatus Tayloriibacteriota bacterium
30991821 30991821 PRJNA404067_P_NODE_43134_length_180_cov_4.025210_g42747_i0 PRJNA404067 43134 180 4.02521 7.245378 Candidatus Tayloriibacteriota bacterium 2052153 Bacteria Bacteria 51.2 1.62e-5   NR MDB5204823.1 2052153 g42747 i0 60 0.75 45 18 75 0 23 157 1012 1056 MDB5204823.1 isoleucyl-tRNA synthetase, isoleucyl-tRNA synthetase [Candidatus Taylorbacteria bacterium] diamond 135 51.2 1 Bacteria Bacteria candidate phyla   Candidatus Tayloriibacteriota         Candidatus Tayloriibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;