RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA404067" and tax_phylum = "Candidatus Sungiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Sungiibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA404067 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28307185 28307185 PRJNA404067_P_NODE_38366_length_201_cov_1.414286_g37979_i0 PRJNA404067 38366 201 1.414286 2.84271486 Candidatus Sungiibacteriota bacterium 2750080 Bacteria Bacteria 114 1.02e-27   NR MBI3442823.1 2750080 g37979 i0 80.3 0.985074626865672 66 13 98.5 0 198 1 1423 1488 MBI3442823.1 NYN domain-containing protein [Candidatus Sungiibacteriota bacterium] diamond 198 114 1 Bacteria Bacteria candidate phyla   Candidatus Sungiibacteriota         Candidatus Sungiibacteriota bacterium
32573431 32573431 PRJNA404067_P_NODE_35659_length_204_cov_0.895105_g35272_i0 PRJNA404067 35659 204 0.895105 1.8260142 Candidatus Sungiibacteriota bacterium 2750080 Bacteria Bacteria 85.9 1.64e-18   NR QQG44882.1 2750080 g35272 i0 71.4 0.823529411764706 56 16 82.4 0 168 1 1 56 QQG44882.1 MAG: membrane protein insertase YidC [Candidatus Sungiibacteriota bacterium] diamond 168 85.9 1 Bacteria Bacteria candidate phyla   Candidatus Sungiibacteriota         Candidatus Sungiibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;