RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA404067" and tax_phylum = "Candidatus Kapaibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA404067 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27296696 27296696 PRJNA404067_P_NODE_20903_length_234_cov_1.104046_g20516_i0 PRJNA404067 20903 234 1.104046 2.58346764 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 80.1 9.9e-18   NR HPI21183.1 2447898 g20516 i0 87.2 0.5 39 5 50 0 2 118 39 77 HPI21183.1 hypothetical protein [Candidatus Kapaibacterium sp.] diamond 117 80.1 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
32383364 32383364 PRJNA404067_P_NODE_29739_length_212_cov_1.066225_g29352_i0 PRJNA404067 29739 212 1.066225 2.260397 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 133 1.19e-34   NR MCS7302314.1 2447898 g29352 i0 94.3 2.97169811320755 70 4 99.1 0 212 3 263 332 MCS7302314.1 DUF1501 domain-containing protein [Candidatus Kapaibacterium sp.] diamond 630 133 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;