RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA404067" and tax_phylum = "Candidatus Hodarchaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hodarchaeota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA404067 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31307686 31307686 PRJNA404067_P_NODE_32475_length_207_cov_2.479452_g32088_i0 PRJNA404067 32475 207 2.479452 5.13246564 Candidatus Hodarchaeales archaeon 3069329 Archaea Archaea 61.6 4.42e-9   NR HKZ41727.1 3069329 g32088 i0 86.7 0.434782608695652 30 4 43.5 0 207 118 288 317 HKZ41727.1 thioredoxin-disulfide reductase [Candidatus Hodarchaeales archaeon] diamond 90 61.6 1 Archaea   Promethearchaeati Candidatus Hodarchaeota Candidatus Hodarchaeia Candidatus Hodarchaeales     Candidatus Hodarchaeales archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;