RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA404067", tax_kingdom = "Shotokuvirae" and tax_phylum = "Cossaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Cossaviricota · 3 ✖

tax_kingdom 1

  • Shotokuvirae · 3 ✖

bioproject 1

  • PRJNA404067 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2965605 2965605 PRJNA404067_P_NODE_41823_length_189_cov_2.921875_g41436_i0 PRJNA404067 41823 189 2.921875 5.52234375 Parvoviridae sp. 1940570 Viruses Viruses 350 5.14e-92   NTclustered gi|2413975755|gb|OP933681.1| 1940570 g41436 i0 100 1.24338624338624 189 0 100 0 1 189 1133 1321 MAG: Parvoviridae sp. isolate fi099par3 replication protein and capsid protein genes, complete cds blastn 235 350 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvoviridae sp.
14443374 14443374 PRJNA404067_P_NODE_15772_length_261_cov_1.670000_g15385_i0 PRJNA404067 15772 261 1.67 4.3587 Luscinia sibilans parvo-like hybrid virus 2794515 Viruses Viruses 375 1.2399999999999995e-99   NTclustered gi|2015373198|gb|MW046538.1| 2794515 g15385 i0 92.996 0.984674329501916 257 18 98 0 5 261 737 993 MAG: Luscinia sibilans parvo-like hybrid virus isolate rtr167par08 genomic sequence, sequence blastn 257 375 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Luscinia sibilans parvo-like hybrid virus
18266311 18266311 PRJNA404067_P_NODE_32415_length_207_cov_3.945205_g32028_i0 PRJNA404067 32415 207 3.945205 8.16657435 Parvoviridae sp. 1940570 Viruses Viruses 377 2.63e-100   NTclustered gi|2413975755|gb|OP933681.1| 1940570 g32028 i0 99.517 1 207 1 100 0 1 207 694 900 MAG: Parvoviridae sp. isolate fi099par3 replication protein and capsid protein genes, complete cds blastn 207 377 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvoviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;