RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA404067" and tax_kingdom = "Pararnavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Pararnavirae · 2 ✖

bioproject 1

  • PRJNA404067 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11284668 11284668 PRJNA404067_P_NODE_3369_length_999_cov_304.036247_g1783_i2 PRJNA404067 3369 999 304.036247 3037.32210753 root 1 Root_unresolved Root_unresolved 1655 0   NTclustered gi|331934|gb|J02255.1|MLMCG 11786 g1783 i2 99.559 90.8908908908909 908 4 91 0 92 999 2596 3503 Moloney murine leukemia virus, complete genome blastn 90800 1655 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
18932814 18932814 PRJNA404067_P_NODE_2575_length_1337_cov_8153.074451_g1783_i1 PRJNA404067 2575 1337 8153.074451 109006.60540987 Gammaretrovirus 153135 Viruses Viruses 1738 0   NTclustered gi|331934|gb|J02255.1|MLMCG 11786 g1783 i1 100 68.4248317127898 941 0 70 0 161 1101 4610 3670 Moloney murine leukemia virus, complete genome blastn 91484 1738 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;