RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA404067", tax_kingdom = "Orthornavirae" and tax_phylum = "Kitrinoviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 4 ✖

tax_kingdom 1

  • Orthornavirae · 4 ✖

bioproject 1

  • PRJNA404067 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6792568 6792568 PRJNA404067_P_NODE_40346_length_195_cov_4.522388_g39959_i0 PRJNA404067 40346 195 4.522388 8.8186566 Triticeae associated alphaendornavirus 2789206 Viruses Viruses 327 2.5e-85   NTclustered gi|1933854982|gb|MW091544.1| 2789206 g39959 i0 96.923 1 195 6 100 0 1 195 8837 8643 Triticeae associated alphaendornavirus isolate Wheeler, complete genome blastn 195 327 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Endornaviridae Alphaendornavirus Triticeae associated alphaendornavirus
13168250 13168250 PRJNA404067_P_NODE_20031_length_237_cov_0.772727_g19644_i0 PRJNA404067 20031 237 0.772727 1.83136299 Triticeae associated alphaendornavirus 2789206 Viruses Viruses 394 3.069999999999999e-105   NTclustered gi|1933854982|gb|MW091544.1| 2789206 g19644 i0 96.624 1 237 8 100 0 1 237 1784 1548 Triticeae associated alphaendornavirus isolate Wheeler, complete genome blastn 237 394 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Endornaviridae Alphaendornavirus Triticeae associated alphaendornavirus
27138200 27138200 PRJNA404067_P_NODE_31622_length_208_cov_3.387755_g31235_i0 PRJNA404067 31622 208 3.387755 7.0465304 Erysiphe necator associated flexivirus 3 2743100 Viruses Viruses 53.1 5.18e-6   NR QKN22675.1 2743100 g31235 i0 87.1 0.447115384615385 31 4 44.7 0 2 94 1962 1992 QKN22675.1 RNA-dependent RNA polymerase [Erysiphe necator associated flexivirus 3] diamond 93 53.1 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales     Erysiphe necator associated flexivirus 3
30770693 30770693 PRJNA404067_P_NODE_38134_length_201_cov_2.250000_g37747_i0 PRJNA404067 38134 201 2.25 4.5225 Chemarfal virus 144 3062966 Viruses Viruses 43.1 0.0158   NR WPR18116.1 3062966 g37747 i0 48.4 1.70149253731343 31 16 46.3 0 130 38 180 210 WPR18116.1 MAG: RNA-dependent RNA polymerase [Chemarfal virus 144] diamond 342 43.1 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Chemarfal virus 144

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;