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contig_metadata

9 rows where bioproject = "PRJNA404067" and tax_kingdom = "Methanobacteriati"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 9 ✖

bioproject 1

  • PRJNA404067 · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11284485 11284485 PRJNA404067_P_NODE_16549_length_255_cov_4.139175_g16162_i0 PRJNA404067 16549 255 4.139175 10.55489625 root 1 Root_unresolved Root_unresolved 54.7 0.006   NTclustered gi|188032290|emb|AM998396.1| 114243 g16162 i0 100 0.556862745098039 29 0 11 0 91 119 574 602 Uncultured euryarchaeote partial 16S rRNA gene, clone HalAS_A1 blastn 142 54.7 1 Archaea   Methanobacteriati Methanobacteriota         uncultured euryarchaeote
27612671 27612671 PRJNA404067_P_NODE_40584_length_194_cov_4.766917_g40197_i0 PRJNA404067 40584 194 4.766917 9.24781898 Methanogenium sp. 2196 Archaea Archaea 53.9 2.05e-6   NR MFA5395581.1 2196 g40197 i0 38.6 0.881443298969072 57 35 88.1 0 22 192 160 216 MFA5395581.1 metallophosphoesterase family protein [Methanogenium sp.] diamond 171 53.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanogenium Methanogenium sp.
28086028 28086028 PRJNA404067_P_NODE_23685_length_226_cov_1.872727_g23298_i0 PRJNA404067 23685 226 1.872727 4.23236302 Methanofastidiosum sp. 2666341 Archaea Archaea 50.1 2.8e-5   NR MEN6379238.1 2666341 g23298 i0 47.7 0.584070796460177 44 23 58.4 0 197 66 4 47 MEN6379238.1 hypothetical protein [Methanofastidiosum sp.] diamond 132 50.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Candidatus Methanofastidiosia Candidatus Methanofastidiosales Candidatus Methanofastidiosaceae Candidatus Methanofastidiosum Methanofastidiosum sp.
29759403 29759403 PRJNA404067_P_NODE_28151_length_215_cov_1.909091_g27764_i0 PRJNA404067 28151 215 1.909091 4.10454565 Thermoplasmatota archaeon 2806419 Archaea Archaea 56.2 3.59e-7   NR MDY6986413.1 2806419 g27764 i0 38.6 2.88837209302326 70 42 97.7 1 2 211 132 200 MDY6986413.1 zonular occludens toxin domain-containing protein [Thermoplasmatota archaeon] diamond 621 56.2 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
30250349 30250349 PRJNA404067_P_NODE_23232_length_227_cov_4.072289_g22845_i0 PRJNA404067 23232 227 4.072289 9.24409603 root 1 Root_unresolved Root_unresolved 68.9 1.74e-11   NR WP_072561916.1 2177 g22845 i0 47.4 2.00881057268722 76 37 96.5 1 6 224 78 153 WP_072561916.1 hypothetical protein [Methanohalophilus halophilus] diamond 456 68.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanohalophilus Methanohalophilus halophilus
30282104 30282104 PRJNA404067_P_NODE_29972_length_211_cov_2.006667_g29585_i0 PRJNA404067 29972 211 2.006667 4.23406737 Methanoculleus 45989 Archaea Archaea 48.5 2.19e-4   NR WP_292489763.1 430615 g29585 i0 52 1.4218009478673 50 24 71.1 0 209 60 299 348 WP_292489763.1 MEMAR_RS02690 family S-layer glycoprotein [Methanoculleus sp. 10] diamond 300 48.9 0.991820040899796 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanoculleus Methanoculleus sp. 10
31244450 31244450 PRJNA404067_P_NODE_43115_length_180_cov_5.689076_g42728_i0 PRJNA404067 43115 180 5.689076 10.2403368 uncultured Methanobrevibacter sp. 253161 Archaea Archaea 53.5 2.46e-6   NR WP_295030335.1 253161 g42728 i0 100 0.433333333333333 26 0 43.3 0 79 2 102 127 WP_295030335.1 hypothetical protein [uncultured Methanobrevibacter sp.] diamond 78 53.5 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter uncultured Methanobrevibacter sp.
32052024 32052024 PRJNA404067_P_NODE_38518_length_201_cov_1.150000_g38131_i0 PRJNA404067 38518 201 1.15 2.3115 Archaea 2157 Archaea Archaea 119 5.51e-30   NR KQM10597.1 1713725 g38131 i0 93.9 1.97014925373134 66 4 98.5 0 3 200 212 277 KQM10597.1 hypothetical protein AOA81_01550 [Methanomassiliicoccales archaeon RumEn M2] diamond 396 119 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales     Methanomassiliicoccales archaeon RumEn M2
32541799 32541799 PRJNA404067_P_NODE_23259_length_227_cov_2.734940_g22872_i0 PRJNA404067 23259 227 2.73494 6.2083138 Methanobrevibacter sp. 66852 Archaea Archaea 112 1.24e-26   NR MBO7713382.1 66852 g22872 i0 68.5 0.964757709251101 73 23 96.5 0 223 5 54 126 MBO7713382.1 hypothetical protein [Methanobrevibacter sp.] diamond 219 112 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;