RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA404067", tax_kingdom = "Metazoa" and tax_phylum = "Cnidaria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA404067 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1081515 1081515 PRJNA404067_P_NODE_41241_length_191_cov_13.369231_g40854_i0 PRJNA404067 41241 191 13.369231 25.53523121 Montipora 46703 Cnidaria other_Eukaryota 124 3.4299999999999995e-24   NTclustered gi|2812107077|ref|XM_068866047.1| 246305 g40854 i0 82.517 1.49738219895288 143 24 74 1 16 157 886 744 PREDICTED: Montipora capricornis NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial-like (LOC138019301), mRNA blastn 286 124 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Montipora Montipora capricornis
23366990 23366990 PRJNA404067_P_NODE_7699_length_417_cov_23.323034_g7321_i0 PRJNA404067 7699 417 23.323034 97.25705178 Halcampoides purpureus 2268653 Cnidaria other_Eukaryota 298 4.67e-76   NTclustered gi|636577266|gb|KJ483100.1| 2268653 g7321 i0 79.858 144.172661870504 422 74 99 10 3 417 2965 2548 Halcampoides purpurea isolate hpu 28S large subunit ribosomal RNA gene and external transcribed spacer, partial sequence blastn 60120 298 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Halcampoididae Halcampoides Halcampoides purpureus
27092139 27092139 PRJNA404067_P_NODE_16542_length_255_cov_14.525773_g16155_i0 PRJNA404067 16542 255 14.525773 37.04072115 root 1 Root_unresolved Root_unresolved 120 2.65e-29   NR PFX11404.1 50429 g16155 i0 67.5 2.71764705882353 77 25 90.6 0 233 3 295 371 PFX11404.1 putative ATP-dependent helicase IRC3, partial [Stylophora pistillata] diamond 693 120 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Stylophora Stylophora pistillata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;