RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA404067", tax_clade = "Stenosarchaea group" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Methanobacteriati · 4 ✖

tax_clade 1

  • Stenosarchaea group · 4 ✖

bioproject 1

  • PRJNA404067 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27612671 27612671 PRJNA404067_P_NODE_40584_length_194_cov_4.766917_g40197_i0 PRJNA404067 40584 194 4.766917 9.24781898 Methanogenium sp. 2196 Archaea Archaea 53.9 2.05e-6   NR MFA5395581.1 2196 g40197 i0 38.6 0.881443298969072 57 35 88.1 0 22 192 160 216 MFA5395581.1 metallophosphoesterase family protein [Methanogenium sp.] diamond 171 53.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanogenium Methanogenium sp.
28086028 28086028 PRJNA404067_P_NODE_23685_length_226_cov_1.872727_g23298_i0 PRJNA404067 23685 226 1.872727 4.23236302 Methanofastidiosum sp. 2666341 Archaea Archaea 50.1 2.8e-5   NR MEN6379238.1 2666341 g23298 i0 47.7 0.584070796460177 44 23 58.4 0 197 66 4 47 MEN6379238.1 hypothetical protein [Methanofastidiosum sp.] diamond 132 50.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Candidatus Methanofastidiosia Candidatus Methanofastidiosales Candidatus Methanofastidiosaceae Candidatus Methanofastidiosum Methanofastidiosum sp.
30250349 30250349 PRJNA404067_P_NODE_23232_length_227_cov_4.072289_g22845_i0 PRJNA404067 23232 227 4.072289 9.24409603 root 1 Root_unresolved Root_unresolved 68.9 1.74e-11   NR WP_072561916.1 2177 g22845 i0 47.4 2.00881057268722 76 37 96.5 1 6 224 78 153 WP_072561916.1 hypothetical protein [Methanohalophilus halophilus] diamond 456 68.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanohalophilus Methanohalophilus halophilus
30282104 30282104 PRJNA404067_P_NODE_29972_length_211_cov_2.006667_g29585_i0 PRJNA404067 29972 211 2.006667 4.23406737 Methanoculleus 45989 Archaea Archaea 48.5 2.19e-4   NR WP_292489763.1 430615 g29585 i0 52 1.4218009478673 50 24 71.1 0 209 60 299 348 WP_292489763.1 MEMAR_RS02690 family S-layer glycoprotein [Methanoculleus sp. 10] diamond 300 48.9 0.991820040899796 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanoculleus Methanoculleus sp. 10

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;