contig_metadata
5 rows where bioproject = "PRJNA404067", tax_clade = "Opisthokonta" and tax_phylum = "Mucoromycota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8068182 | 8068182 | PRJNA404067_P_NODE_42987_length_181_cov_11.500000_g42600_i0 | PRJNA404067 | 42987 | 181 | 11.5 | 20.815 | Mucor velutinosus | 708070 | Fungi | Fungi | 82.4 | 1.96e-11 | NTclustered | gi|2724940447|ref|XM_064822572.1| | 708070 | g42600 | i0 | 84.337 | 5.92817679558011 | 83 | 13 | 46 | 0 | 1 | 83 | 302 | 384 | Mucor velutinosus pseudouridine synthase pus4 (PUS4), partial mRNA | blastn | 1073 | 82.4 | 1 | Eukaryota | Opisthokonta | Fungi | Mucoromycota | Mucoromycetes | Mucorales | Mucoraceae | Mucor | Mucor velutinosus | |
| 19540386 | 19540386 | PRJNA404067_P_NODE_26736_length_218_cov_2.796178_g26349_i0 | PRJNA404067 | 26736 | 218 | 2.796178 | 6.09566804 | Rhizophagus irregularis | 588596 | Fungi | Fungi | 65.1 | 3.79e-12 | NR | PKB93886.1 | 588596 | g26349 | i0 | 67.4 | 0.63302752293578 | 46 | 15 | 63.3 | 0 | 3 | 140 | 5 | 50 | PKB93886.1 hypothetical protein RhiirA5_303674, partial [Rhizophagus irregularis] | diamond | 138 | 65.1 | 1 | Eukaryota | Opisthokonta | Fungi | Mucoromycota | Glomeromycetes | Glomerales | Glomeraceae | Rhizophagus | Rhizophagus irregularis | |
| 19540628 | 19540628 | PRJNA404067_P_NODE_39876_length_197_cov_17.143411_g39489_i0 | PRJNA404067 | 39876 | 197 | 17.143411 | 33.77251967 | Cokeromyces recurvatus | 90255 | Fungi | Fungi | 152 | 1.64e-32 | NTclustered | gi|2324061888|ref|XM_051531209.1| | 90255 | g39489 | i0 | 83.537 | 81.2893401015228 | 164 | 25 | 83 | 2 | 1 | 163 | 498 | 660 | Cokeromyces recurvatus 60S ribosomal protein L2 (BX663DRAFT_550341), partial mRNA | blastn | 16014 | 152 | 1 | Eukaryota | Opisthokonta | Fungi | Mucoromycota | Mucoromycetes | Mucorales | Mucoraceae | Cokeromyces | Cokeromyces recurvatus | |
| 20207308 | 20207308 | PRJNA404067_P_NODE_10976_length_324_cov_2.604563_g10591_i0 | PRJNA404067 | 10976 | 324 | 2.604563 | 8.43878412 | Fungi | 4751 | Fungi | Fungi | 582 | 8.729999999999998e-162 | NTclustered | gi|1694443677|ref|NG_065498.1| | 4841 | g10591 | i0 | 99.077 | 100.320987654321 | 325 | 2 | 100 | 1 | 1 | 324 | 1103 | 779 | Mucor racemosus NRRL 3640 18S rRNA gene, partial sequence; from TYPE material | blastn | 32504 | 582 | 1 | Eukaryota | Opisthokonta | Fungi | Mucoromycota | Mucoromycetes | Mucorales | Mucoraceae | Mucor | Mucor racemosus | |
| 30960173 | 30960173 | PRJNA404067_P_NODE_31514_length_209_cov_0.864865_g31127_i0 | PRJNA404067 | 31514 | 209 | 0.864865 | 1.80756785 | Rhizophagus irregularis | 588596 | Fungi | Fungi | 47 | 7.18e-4 | NR | PKC72021.1 | 588596 | g31127 | i0 | 42.9 | 0.904306220095694 | 63 | 32 | 90.4 | 2 | 193 | 5 | 96 | 154 | PKC72021.1 F-actin capping protein, alpha subunit [Rhizophagus irregularis] | diamond | 189 | 47 | 1 | Eukaryota | Opisthokonta | Fungi | Mucoromycota | Glomeromycetes | Glomerales | Glomeraceae | Rhizophagus | Rhizophagus irregularis |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;