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contig_metadata

16 rows where bioproject = "PRJNA404067", tax_clade = "Discoba" and tax_phylum = "Heterolobosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 16 ✖

tax_clade 1

  • Discoba · 16 ✖

bioproject 1

  • PRJNA404067 · 16 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
414362 414362 PRJNA404067_P_NODE_13921_length_279_cov_5.022936_g13534_i0 PRJNA404067 13921 279 5.022936 14.01399144 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 135 2.4800000000000003e-27   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g13534 i0 83.803 41.7562724014337 142 23 51 0 1 142 3047 2906 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 11650 135 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
2965144 2965144 PRJNA404067_P_NODE_12923_length_291_cov_47.360870_g12536_i0 PRJNA404067 12923 291 47.36087 137.8201317 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 353 6.599999999999998e-93   NTclustered gi|290991601|ref|XM_002678378.1| 5762 g12536 i0 90.37 0.927835051546392 270 24 92 2 23 291 608 340 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_36356), partial mRNA blastn 270 353 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
2965576 2965576 PRJNA404067_P_NODE_39303_length_200_cov_4.928058_g38916_i0 PRJNA404067 39303 200 4.928058 9.856116 Heterolobosea sp. HGG1 1237086 Heterolobosea other_Eukaryota 296 7.269999999999998e-76   NTclustered gi|407750695|gb|JX441981.1| 1237086 g38916 i0 93.467 30.64 199 13 99 0 2 200 208 10 Heterolobosea sp. HGG1 18S ribosomal RNA gene, partial sequence blastn 6128 296 1 Eukaryota Discoba   Heterolobosea         Heterolobosea sp. HGG1
3631957 3631957 PRJNA404067_P_NODE_11783_length_308_cov_3.255061_g11397_i0 PRJNA404067 11783 308 3.255061 10.02558788 Allovahlkampfia 1217108 Heterolobosea other_Eukaryota 558 1.39e-154   NTclustered gi|89148133|gb|DQ388519.1| 373143 g11397 i0 99.353 44.7045454545455 309 1 100 1 1 308 2230 2538 Heterolobosea sp. BA 16S small subunit ribosomal RNA gene, partial sequence; and His-Cys box homing endonuclease gene, complete cds blastn 13769 558 1 Eukaryota Discoba   Heterolobosea         Heterolobosea sp. BA
4909306 4909306 PRJNA404067_P_NODE_25884_length_220_cov_5.830189_g25497_i0 PRJNA404067 25884 220 5.830189 12.8264158 Allovahlkampfia 1217108 Heterolobosea other_Eukaryota 396 7.809999999999997e-106   NTclustered gi|399764157|gb|JQ271668.1| 1217110 g25497 i0 99.091 42.6681818181818 220 2 100 0 1 220 236 17 Allovahlkampfia sp. PKD 2011a strain 4165 18S ribosomal RNA gene, partial sequence blastn 9387 396 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp. PKD 2011a
5518670 5518670 PRJNA404067_P_NODE_6025_length_523_cov_4.296537_g5655_i0 PRJNA404067 6025 523 4.296537 22.47088851 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 274 1.01e-68   NTclustered gi|2618963742|gb|OR769034.1| 5762 g5655 i0 76.611 66.9713193116635 543 99 100 20 1 523 4792 5326 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 35026 274 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
6792267 6792267 PRJNA404067_P_NODE_23666_length_226_cov_2.248485_g23279_i0 PRJNA404067 23666 226 2.248485 5.0815761 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 390 3.749999999999999e-104   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g23279 i0 97.788 3 226 5 100 0 1 226 4210 3985 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 678 390 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
11284597 11284597 PRJNA404067_P_NODE_25229_length_222_cov_1.763975_g24842_i0 PRJNA404067 25229 222 1.763975 3.9160245 Naegleria 5761 Heterolobosea other_Eukaryota 100 6.93e-17   NTclustered gi|2618963742|gb|OR769034.1| 5762 g24842 i0 96.667 27.6441441441441 60 2 27 0 5 64 5116 5057 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 6137 100 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
14443682 14443682 PRJNA404067_P_NODE_35072_length_204_cov_2.006993_g34685_i0 PRJNA404067 35072 204 2.006993 4.09426572 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 239 1.27e-58   NTclustered gi|2124390888|ref|XM_044710315.1| 5763 g34685 i0 89.785 5.49509803921569 186 19 91 0 4 189 103 288 Naegleria fowleri uncharacterized protein (FDP41_006657), partial mRNA blastn 1121 239 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
18933060 18933060 PRJNA404067_P_NODE_5975_length_527_cov_5.560086_g5605_i0 PRJNA404067 5975 527 5.560086 29.30165322 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 813 0   NTclustered gi|407750695|gb|JX441981.1| 1237086 g5605 i0 94.518 48.3624288425047 529 26 100 2 1 527 1668 1141 Heterolobosea sp. HGG1 18S ribosomal RNA gene, partial sequence blastn 25487 819 0.992673992673993 Eukaryota Discoba   Heterolobosea         Heterolobosea sp. HGG1
20816031 20816031 PRJNA404067_P_NODE_10837_length_327_cov_5.387218_g10452_i0 PRJNA404067 10837 327 5.387218 17.61620286 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 147 1.37e-30   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g10452 i0 75.298 26.3822629969419 336 67 99 11 2 327 2850 3179 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 8627 147 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
21483355 21483355 PRJNA404067_P_NODE_9137_length_369_cov_12.808442_g8753_i0 PRJNA404067 9137 369 12.808442 47.26315098 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 621 2.1299999999999996e-173   NTclustered gi|407750695|gb|JX441981.1| 1237086 g8753 i0 97.019 74.0921409214092 369 11 100 0 1 369 854 1222 Heterolobosea sp. HGG1 18S ribosomal RNA gene, partial sequence blastn 27340 627 0.990430622009569 Eukaryota Discoba   Heterolobosea         Heterolobosea sp. HGG1
22091335 22091335 PRJNA404067_P_NODE_41298_length_191_cov_2.953846_g40911_i0 PRJNA404067 41298 191 2.953846 5.64184586 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 211 2.56e-50   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g40911 i0 86.842 3.89005235602094 190 24 99 1 1 190 2285 2473 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 743 211 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
22091345 22091345 PRJNA404067_P_NODE_42178_length_188_cov_2.181102_g41791_i0 PRJNA404067 42178 188 2.181102 4.10047176 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 176 9.16e-40   NTclustered gi|2031943113|emb|OD958216.1| 5763 g41791 i0 86.335 1.70212765957447 161 22 86 0 13 173 27345 27505 Naegleria fowleri Karachi_NF001 strain blastn 320 176 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
28938742 28938742 PRJNA404067_P_NODE_45568_length_164_cov_5.922330_g45181_i0 PRJNA404067 45568 164 5.92233 9.7126212 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 84.7 1.99e-17   NR XP_044548673.1 51637 g45181 i0 82 0.914634146341463 50 9 91.5 0 164 15 486 535 XP_044548673.1 uncharacterized protein C9374_004961 [Naegleria lovaniensis] diamond 150 84.7 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
30692372 30692372 PRJNA404067_P_NODE_11493_length_313_cov_3.503968_g11108_i0 PRJNA404067 11493 313 3.503968 10.96741984 Naegleria 5761 Heterolobosea other_Eukaryota 85.9 5.99e-17   NR XP_044569057.1 5763 g11108 i0 41.7 2.96166134185304 103 55 94.9 2 312 16 485 586 XP_044569057.1 uncharacterized protein FDP41_007521 [Naegleria fowleri] diamond 927 85.9 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;