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contig_metadata

11 rows where bioproject = "PRJNA404067", tax_clade = "Discoba" and tax_phylum = "Euglenozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 11 ✖

tax_clade 1

  • Discoba · 11 ✖

bioproject 1

  • PRJNA404067 · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2356957 2356957 PRJNA404067_P_NODE_44922_length_168_cov_4.009346_g44535_i0 PRJNA404067 44922 168 4.009346 6.73570128 Rhynchomonadidae 2728145 Euglenozoa other_Eukaryota 300 4.56e-77   NTclustered gi|2863692042|gb|PQ665284.1| 35226 g44535 i0 98.81 94.9702380952381 168 2 100 0 1 168 152 319 Dimastigella trypaniformis isolate 1 small subunit ribosomal RNA gene, partial sequence blastn 15955 300 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida Rhynchomonadidae Dimastigella Dimastigella trypaniformis
4909310 4909310 PRJNA404067_P_NODE_26544_length_219_cov_1.107595_g26157_i0 PRJNA404067 26544 219 1.107595 2.42563305 Leishmania 5658 Euglenozoa other_Eukaryota 122 1.4599999999999995e-23   NTclustered gi|2593250474|emb|OY748421.1| 5660 g26157 i0 97.222 77.9680365296804 72 2 66 0 48 119 990924 990995 Leishmania braziliensis isolate MHOM/BR/75/M2904 genome assembly, chromosome: 27 blastn 17075 122 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania braziliensis
7459166 7459166 PRJNA404067_P_NODE_18486_length_242_cov_6.082873_g18099_i0 PRJNA404067 18486 242 6.082873 14.72055266 Trypanosoma 5690 Euglenozoa other_Eukaryota 233 7.25e-57   NTclustered gi|162233|gb|M63699.1|TRBRGS1 5693 g18099 i0 89.062 100.99173553719 192 15 78 4 17 204 67 256 T.cruzi S3 ribosomal RNA gene blastn 24440 233 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
8734470 8734470 PRJNA404067_P_NODE_9427_length_361_cov_2.420000_g9042_i0 PRJNA404067 9427 361 2.42 8.7362 Neobodo 312470 Euglenozoa other_Eukaryota 510 4.6999999999999995e-140   NTclustered gi|698162703|dbj|AB996690.1| 204529 g9042 i0 92.265 101.08864265928 362 25 100 3 1 361 1241 882 Uncultured kinetoplastid gene for 18S rRNA, partial sequence, clone: Lake Biwa hypolimnion 1 blastn 36493 514 0.992217898832685 Eukaryota Discoba   Euglenozoa Kinetoplastea       uncultured kinetoplastid
11284907 11284907 PRJNA404067_P_NODE_9069_length_372_cov_3.897106_g8685_i0 PRJNA404067 9069 372 3.897106 14.49723432 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 669 0   NTclustered gi|479140|emb|X76494.1| 35226 g8685 i0 99.191 77.9596774193548 371 3 99 0 2 372 994 1364 D.trypaniformis 18S rRNA gene, 2062bp blastn 29001 671 0.997019374068554 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida Rhynchomonadidae Dimastigella Dimastigella trypaniformis
18266049 18266049 PRJNA404067_P_NODE_14955_length_268_cov_2.062802_g14568_i0 PRJNA404067 14955 268 2.062802 5.52830936 Dimastigella trypaniformis 35226 Euglenozoa other_Eukaryota 490 4.39e-134   NTclustered gi|20331089|gb|AY028447.1| 35226 g14568 i0 99.627 71.3619402985075 268 1 100 0 1 268 274 7 Dimastigella trypaniformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 19125 490 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida Rhynchomonadidae Dimastigella Dimastigella trypaniformis
19540252 19540252 PRJNA404067_P_NODE_18936_length_240_cov_2.134078_g18549_i0 PRJNA404067 18936 240 2.134078 5.1217872 Trypanosoma congolense 5692 Euglenozoa other_Eukaryota 178 3.4099999999999998e-40   NTclustered gi|1040858|gb|U22317.1|TCU22317 5692 g18549 i0 83.673 64.525 196 24 80 8 22 213 6875 7066 Trypanosoma congolense Kilifi-type 18S, 5.8S, 28S-LS1, srRNA1, complete sequence, and 28S-LS2 ribosomal RNA, partial sequence blastn 15486 178 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma congolense
21483057 21483057 PRJNA404067_P_NODE_26717_length_218_cov_3.547771_g26330_i0 PRJNA404067 26717 218 3.547771 7.73414078 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 58.4 4.14e-4   NTclustered gi|2414483|emb|Y00055.1| 5656 g26330 i0 100 14.4908256880734 31 0 14 0 188 218 7401 7431 Crithidia fasciculata ribosomal DNA repeat (complete) blastn 3159 58.4 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Crithidia Crithidia fasciculata
22758349 22758349 PRJNA404067_P_NODE_34958_length_204_cov_5.531469_g34571_i0 PRJNA404067 34958 204 5.531469 11.28419676 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 231 2.13e-56   NTclustered gi|2414483|emb|Y00055.1| 5656 g34571 i0 97.08 84.3578431372549 137 4 67 0 57 193 7198 7062 Crithidia fasciculata ribosomal DNA repeat (complete) blastn 17209 233 0.991416309012876 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Crithidia Crithidia fasciculata
25307504 25307504 PRJNA404067_P_NODE_30820_length_209_cov_33.743243_g30433_i0 PRJNA404067 30820 209 33.743243 70.52337787 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 257 3.6200000000000005e-64   NTclustered gi|1207899568|ref|XR_002460820.1| 347515 g30433 i0 92.391 143.435406698565 184 8 100 5 31 209 1575 1757 Leishmania major strain Friedlin 28S ribosomal RNA (LSU-alpha) partial rRNA blastn 29978 257 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania major
28166053 28166053 PRJNA404067_P_NODE_34785_length_205_cov_0.888889_g34398_i0 PRJNA404067 34785 205 0.888889 1.82222245 Phytomonas 5706 Euglenozoa other_Eukaryota 43.9 0.00857   NR CCW69476.1 223615 g34398 i0 34 2.59024390243902 53 34 77.6 1 203 45 51 102 CCW69476.1 unnamed protein product [Phytomonas sp. Hart1] diamond 531 43.9 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Phytomonas Phytomonas sp. Hart1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;